Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 174 2e-38
seq14 131 2e-25
seq410 84.2 2e-11
>seq1
Length=33571687
Score = 174 bits (192), Expect = 2e-38
Identities = 319/465 (69%), Gaps = 2/465 (0%)
Strand=Plus/Plus
Query 48117 TATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACAC 48176
||||| || |||||||| || || | |||| | ||| ||||||||||||| ||||||
Sbjct 24628359 TATAATTTATCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACAC 24628418
Query 48177 ATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGA 48236
|| || ||| | || | ||||| |||| || | || || ||||| | |
Sbjct 24628419 ATTAAACTCCACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAA 24628478
Query 48237 GCTATAAATAAA-TCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAG 48295
|| ||| | || || || | ||| |||||| || || | ||| |||| || || ||
Sbjct 24628479 GC-ATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAG 24628537
Query 48296 AAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTT 48355
||| || | || ||||||||||| ||||| ||||| || || | | || |||| ||
Sbjct 24628538 AAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTT 24628597
Query 48356 ATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAAT 48415
|| || |||||||| | || | ||||| || || || ||||| | ||| || || |
Sbjct 24628598 GTTTCCACCTTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAA 24628657
Query 48416 ACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT 48475
|||||| |||| ||| || || || ||||| | | ||| | ||||||||| | ||
Sbjct 24628658 ACCATTAGATACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAAC 24628717
Query 48476 TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATA 48535
| ||| || ||||| || ||| | || |||||| | || || ||||||||
Sbjct 24628718 ACTCAAACCAATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATA 24628777
Query 48536 AATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACT 48580
||||||||| ||||| || || |||| | | || ||||||||
Sbjct 24628778 AATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822
Score = 127 bits (140), Expect = 2e-24
Identities = 239/348 (69%), Gaps = 5/348 (1%)
Strand=Plus/Plus
Query 47100 ATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCT 47159
|| || | ||| ||||| ||| ||||||||| || ||||||| ||| || ||||| |
Sbjct 24627103 ATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATTTTC 24627162
Query 47160 AAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAA-TTTGTTTAATGTCTTCTGG 47218
||||| | |||| | |||||||| |||||||| || | ||| || ||| || || ||
Sbjct 24627163 AAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAAT-TCATCAGG 24627221
Query 47219 GAGATTAGTA---TTTTGAATAGATCCTCCgttttctataattttgttttttaattcatt 47275
| | | | || |||| || || |||| | || |||| || || | || |
Sbjct 24627222 AATCCTTGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCCTC 24627281
Query 47276 tgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTGAAATTC 47335
||| || | | || || || ||| || | ||||||||| || | || |||||
Sbjct 24627282 GTCCCACAGATCCCTGTCTGTCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAATTC 24627341
Query 47336 TCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATT 47395
|||||| || || | | | | || || || ||||| || || ||||| ||||| || ||
Sbjct 24627342 TCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTGTT 24627401
Query 47396 TCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAA 47443
|| |||||||| || || || ||||| ||||| | |||| ||| ||
Sbjct 24627402 GCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAA 24627449
Score = 86.0 bits (94), Expect = 7e-12
Identities = 128/181 (71%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 47865 ACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTA 47924
|||||| |||||| || |||||||||| ||| || || ||||| || | |||| || |
Sbjct 24628033 ACAAACATATTAACGGCAATAGATGCTAAATTGCACACGGCTACTTCGTCTGGAGAAGAA 24628092
Query 47925 TATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT- 47983
|| || | | ||| | |||| ||||| | | |||||||||| | ||||| |||||
Sbjct 24628093 TACTGCACAACTTCCGTGCATAAATTACTGCTTCTGATAGTACCAAGGTTTTGTTGATTG 24628152
Query 47984 -ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAG 48042
||| | |||| || ||||| | ||| |||| ||||||||||| | ||||
Sbjct 24628153 GATTTGCGAT--TACAGTGATCTTTGTATAACATGTAAGGGGTTCCAGTTTCAACTTGAG 24628210
Query 48043 A 48043
|
Sbjct 24628211 A 24628211
>seq14
Length=421909
Score = 131 bits (144), Expect = 2e-25
Identities = 219/317 (69%), Gaps = 0/317 (0%)
Strand=Plus/Minus
Query 48270 TTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329
|| ||| |||| |||| | ||||| || || | ||||| |||||||| || |||| |
Sbjct 276230 TTACCAATATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGA 276171
Query 48330 TATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTG 48389
|| | || | | |||| || | ||| || || |||||||| ||| | | | ||||||
Sbjct 276170 TAAAGAGCAAATGCACCAGGCCTTTTGTTTCCACCTTGATCAATAAAGCGTACTGTATTG 276111
Query 48390 TTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAA 48449
|| | ||||| | ||| || || | ||||||| | ||||| | | | ||| |
Sbjct 276110 TTGAATACTCTGATCATAGGTACTAATCCATTTGCAAATCCATTATTGCTAGCAATCGCA 276051
Query 48450 CTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATT 48509
|||| ||||||| |||||| || ||||| ||||||||||| ||| ||
Sbjct 276050 GTTCCTTTAGCTCTAATATTATGAACACTTATACCAATACCACCTGCGGATTTGCTAATA 275991
Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569
| ||||| | || | || || ||||||||||||||||||| || ||||| | |
Sbjct 275990 ATTGCACATCTCTTTAATGTTTCGAAAATTCCTTCTATACTATCTTCAATCATGGTAAGA 275931
Query 48570 AGAAAACAACTAGACAT 48586
| |||||||||| ||||
Sbjct 275930 ATAAAACAACTAAACAT 275914
Score = 107 bits (118), Expect = 2e-18
Identities = 128/173 (74%), Gaps = 4/173 (2%)
Strand=Plus/Minus
Query 47864 AACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGT 47923
||||||| |||||| || || ||||||| |||||| || ||||| || |||||| ||
Sbjct 276819 AACAAACATATTAACAGCAATGGATGCTAAATTACACACTGCTACTTCGTTTGGAGAAGA 276760
Query 47924 ATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT 47983
|||||||| ||||||| |||| ||||| | ||| ||||| || | |||||| |||||
Sbjct 276759 GTATTGTATAATTTCAGTGCATAAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATT 276700
Query 47984 --ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTC 48034
||| | | || || || || |||||| |||| |||||||||||
Sbjct 276699 TGATTTACGAT--TGCAGTGATCTTTATAGAGCATATAAGGAGTTCCAGTTTC 276649
Score = 107 bits (118), Expect = 2e-18
Identities = 166/236 (70%), Gaps = 6/236 (3%)
Strand=Plus/Minus
Query 47232 TGAATAGATCCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgt 47291
|||||||| || ||| | || |||| |||||| | ||||| |||||| ||||
Sbjct 277624 TGAATAGAACCATTGTTGGCAATTATTTCGTTTTTCATTTCATCATCCCAAAGATTTCTC 277565
Query 47292 tcagttaatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTA 47351
| ||||| ||||| | ||| ||||||||||| |||||||| || | || |
Sbjct 277564 TTTGTTAAATCATTTAATAAATGTGGATTAACAATAATGAATTCTCCTGACAAAAC---A 277508
Query 47352 CGGCTA---TATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGA 47408
|| ||| || ||||||||||| || || || | |||||||| ||||| || || |||
Sbjct 277507 CGTCTAGTGTAAATATTACTTGTGTAAGGCTCCACTGATTCATTGTTTCCCAATATCTGA 277448
Query 47409 GCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTT 47464
|| || || ||||| ||||| | ||||| | || ||| | |||||||| ||
Sbjct 277447 GCTGTAGAAGCTGTTGGCATTGGTGCAAGAAGTAGTGAATTACGAACTCCATACTT 277392
Score = 95.1 bits (104), Expect = 1e-14
Identities = 120/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109
|||| ||||| |||||||| ||| | ||| | |||| | | ||||||| ||
Sbjct 277885 TCCAGCCATAAAAATGCATGGAAGTAAGTTTTTCAGTTGTAGGCTTAGCCATATGAACAT 277826
Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169
| | |||||| || |||||||| || |||| ||| || ||||| | ||||||||
Sbjct 277825 TTACAGATTGTGATTGGTCAATAAAAGCGCCTCGATCTGCAGCCATTTTTAAAATAATTT 277766
Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTT 47214
| || ||||||||||||||||||||||| | || ||| | ||||
Sbjct 277765 TCTGAGGTATCTCCCATACTGTTTTATATAATTCTTTCAAATCTT 277721
>seq410
Length=4553683
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 19459 TCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCA 19518
||||||||||| ||||||||||| ||||| || |||||||| ||||||| ||| || ||
Sbjct 2615640 TCTACTTCTTCTACTGTCCAAAACGAAGCTTCGGCTTTTTTGTACATGTGCCAAATGTCG 2615581
Query 19519 CGATATTGTATAGGAAATATAACAAATCT 19547
| |||| || ||||| | ||||||||
Sbjct 2615580 GGCCATTGGATTGGAAACAATACAAATCT 2615552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562065953256720
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