Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_016158.1
Length=49576
Score E
Sequences producing significant alignments: (Bits) Value
seq2511 260 4e-65
>seq2511
Length=1546
Score = 260 bits (288), Expect = 4e-65
Identities = 318/430 (74%), Gaps = 8/430 (2%)
Strand=Plus/Plus
Query 56 AAAACCGGACTGGGAGGCCATCGAGACGGCGTACCGGGCCGGAGTGATGTCCCTCCGAGA 115
|| ||| || ||||||||||||||| |||| ||||| || || |||||||| ||||||||
Sbjct 1048 AAGACCAGATTGGGAGGCCATCGAGTCGGCTTACCGAGCTGGCGTGATGTCACTCCGAGA 1107
Query 116 AATAGCGTCACAGCACGGTATCAGTGAAGGCGCTATCCGTAAGCGTGCCAAGCGCGACGA 175
|||||| |||||||| ||||| |||||||||||| || || | || ||| || ||
Sbjct 1108 AATAGCTTCACAGCATGGTATATCTGAAGGCGCTATACGCAAAAGAGCAAAGAAGGATGA 1167
Query 176 CTGGTCGCGTGACCTCAATGCGAAGATTCAGCAAAAGGCTGATGATCTGGTACGCAAACA 235
|||||||| ||||| || || ||||| | || |||||| ||||||||||| |
Sbjct 1168 ATGGTCGCGAGACCTTAACGCAAAGATAAAATCCCGTGCAGATGATTTGGTACGCAAAGA 1227
Query 236 GGAGGTACGCAAGCNGGTACGCAACGAA--AGCACTTTGACCGAGCGCGTACTGATAGAG 293
||| |||||||||| |||||||| |||| || ||||| | ||||||||||| || |||
Sbjct 1228 GGAAGTACGCAAGCAGGTACGCAGCGAAACAGTACTTT--CAGAGCGCGTACTTATTGAG 1285
Query 294 GCGACTGCCGAGGTAATTGCCACGGTACGCATGGAGCACCGGGGAGACATCCGCCGGGCT 353
||||| ||||| || || || | || |||||||| ||| |||| || || || |||||
Sbjct 1286 GCGACCGCCGAAGTCATCGCTAGTGTTCGCATGGAACACAGGGGCGATATTCGAAGGGCT 1345
Query 354 CGTGAATTGACCAACACGCTATTCGATGAACTTGGTGCGCAGTGCGCAGATGTAAGCGCG 413
| || | ||||| | |||| ||||| || || | || || ||||| || |
Sbjct 1346 AGAGAGCTAACCAATAACTTATTTGATGAGCTATCAGCTGAATGTGCCGATGT--GCCAG 1403
Query 414 CTCGA--GCAGTTGGGCGACATCATGTTTGATCCCGACGATAAAGGCCGGGACCGGCTCA 471
|| | | |||||||| | |||||| ||| || ||||| || || || ||| |
Sbjct 1404 CTTTAAGTAAATTGGGCGAGCTAATGTTTAGTCCTGATGATAACGGGCGCGATAAGCTAA 1463
Query 472 ATGAAATTTA 481
||||||||||
Sbjct 1464 ATGAAATTTA 1473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 158510120856488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |