Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq2511 260 4e-65 >seq2511 Length=1546 Score = 260 bits (288), Expect = 4e-65 Identities = 318/430 (74%), Gaps = 8/430 (2%) Strand=Plus/Plus Query 56 AAAACCGGACTGGGAGGCCATCGAGACGGCGTACCGGGCCGGAGTGATGTCCCTCCGAGA 115 || ||| || ||||||||||||||| |||| ||||| || || |||||||| |||||||| Sbjct 1048 AAGACCAGATTGGGAGGCCATCGAGTCGGCTTACCGAGCTGGCGTGATGTCACTCCGAGA 1107 Query 116 AATAGCGTCACAGCACGGTATCAGTGAAGGCGCTATCCGTAAGCGTGCCAAGCGCGACGA 175 |||||| |||||||| ||||| |||||||||||| || || | || ||| || || Sbjct 1108 AATAGCTTCACAGCATGGTATATCTGAAGGCGCTATACGCAAAAGAGCAAAGAAGGATGA 1167 Query 176 CTGGTCGCGTGACCTCAATGCGAAGATTCAGCAAAAGGCTGATGATCTGGTACGCAAACA 235 |||||||| ||||| || || ||||| | || |||||| ||||||||||| | Sbjct 1168 ATGGTCGCGAGACCTTAACGCAAAGATAAAATCCCGTGCAGATGATTTGGTACGCAAAGA 1227 Query 236 GGAGGTACGCAAGCNGGTACGCAACGAA--AGCACTTTGACCGAGCGCGTACTGATAGAG 293 ||| |||||||||| |||||||| |||| || ||||| | ||||||||||| || ||| Sbjct 1228 GGAAGTACGCAAGCAGGTACGCAGCGAAACAGTACTTT--CAGAGCGCGTACTTATTGAG 1285 Query 294 GCGACTGCCGAGGTAATTGCCACGGTACGCATGGAGCACCGGGGAGACATCCGCCGGGCT 353 ||||| ||||| || || || | || |||||||| ||| |||| || || || ||||| Sbjct 1286 GCGACCGCCGAAGTCATCGCTAGTGTTCGCATGGAACACAGGGGCGATATTCGAAGGGCT 1345 Query 354 CGTGAATTGACCAACACGCTATTCGATGAACTTGGTGCGCAGTGCGCAGATGTAAGCGCG 413 | || | ||||| | |||| ||||| || || | || || ||||| || | Sbjct 1346 AGAGAGCTAACCAATAACTTATTTGATGAGCTATCAGCTGAATGTGCCGATGT--GCCAG 1403 Query 414 CTCGA--GCAGTTGGGCGACATCATGTTTGATCCCGACGATAAAGGCCGGGACCGGCTCA 471 || | | |||||||| | |||||| ||| || ||||| || || || ||| | Sbjct 1404 CTTTAAGTAAATTGGGCGAGCTAATGTTTAGTCCTGATGATAACGGGCGCGATAAGCTAA 1463 Query 472 ATGAAATTTA 481 |||||||||| Sbjct 1464 ATGAAATTTA 1473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158510120856488