Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq236 141 8e-29
>seq236
Length=27037145
Score = 141 bits (156), Expect = 8e-29
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225
||||||||||||||||||||||| || || || || |||| ||| |||||||| || |
Sbjct 26890850 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 26890791
Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30285
||| || | |||||||| || | |||| ||||||| |||||| ||||| ||
Sbjct 26890790 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 26890731
Query 30286 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30345
|| |||| |||||||| | ||| ||||| || | | |||||| |||| |||||| ||
Sbjct 26890730 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 26890671
Query 30346 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386
|| || ||||| || ||||||| || || || |||||
Sbjct 26890670 ACAGCACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630
Score = 125 bits (138), Expect = 6e-24
Identities = 170/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
|||||| ||||| || || || ||||||||||| || ||||| ||||| || || ||
Sbjct 25468359 CATGTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATC 25468418
Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269
|| || || | | || ||||| | |||| | || |||||||| ||||||||||
Sbjct 25468419 GCCTTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTC 25468478
Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30329
|||||| || || || || | || ||||| |||| ||| || || |||| || ||||||
Sbjct 25468479 CCAGATTTTCACGCCTTTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCA 25468538
Query 30330 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386
| || ||| || | ||||| ||| || || | ||| || ||||| || || ||
Sbjct 25468539 GAACAACTCTTCTGCCACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408587231795354
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |