Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq5383 345 1e-90 >seq5383 Length=901 Score = 345 bits (382), Expect = 1e-90 Identities = 594/860 (69%), Gaps = 18/860 (2%) Strand=Plus/Minus Query 39424 CCGTACAAACGCGATGGTGAGTTGTTGCAGGTCAAGAGAATCAGCACCGAACGTCCGGAC 39483 |||||||| || || || || || |||||||| ||| |||||||||| || || || | Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801 Query 39484 GGGAAGAAAGTCATCATGGCAGAAGGTGACTGTGAACCCTGTCTGTTCGGATGGCAGGCT 39543 || || || ||||| ||||| |||| |||||||||| || || || || |||||||| Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741 Query 39544 CT--CGATGCTGGCGTGAGGGCTGTTG-TACTTTGCGAAGGCGAAATTGATTGCATGAGC 39600 | | | || ||| | ||| | || || |||||||||||||| |||||||| Sbjct 740 ATGCCAAACAATGCAAGAG---TCTTGATCCTGTGTGAAGGCGAAATTGACTGCATGAGT 684 Query 39601 TATGCGCAATACGGAATTCCGGCGCTATCTGTCCCGTTCGGTGGCGGGAAAGGCGCTAAA 39660 ||| || ||||| | || || ||||||| ||||| ||||| || || || || || Sbjct 683 TATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGCAAAG 624 Query 39661 CAACAGTGGATTGAGTTTGAATACCATAACCTAGACAGGTTTGAGGAAATATTCATTTCG 39720 || || ||||||||||| |||||||| |||||||| | || ||||| | | || Sbjct 623 CAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTTATCA 564 Query 39721 ATGGATGTTGATGATGTAGGCCGCGAAGCTGCAAGGGAAATCGCAAGCCGACTGGGTGAA 39780 | ||| ||||| || || | || |||| ||||| || || | ||||| ||| Sbjct 563 CTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGGAGAA 504 Query 39781 CATCGCTGTCGTCTGGTTACACTGCCACACAAAGATATCAACGAATGCCTGATGAACGGC 39840 || || ||||| || | | | | || | |||||||||||||||||| | | || Sbjct 503 CACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGCTGGA 444 Query 39841 GTCGCCGAGGATGAAATCTGGCAGTACATTGGCACGGCTTCATACTTCGACCCGGAAGAA 39900 | | || ||||| | | | | ||||| || || | ||||| ||||| || ||| Sbjct 443 ATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGAGGAA 384 Query 39901 CTCTACAGCGCTCGTGAGTTTTACCAGGATACAGTCAATGCTTTCTACGGCAAACAGCAG 39960 || || ||||||||||| ||||| |||||| |||| |||| || || |||||| | || Sbjct 383 CTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGAACAA 324 Query 39961 TATCTGTTTAACCCACCGTGGGAAACGCTGGCTTACAACTTCCAGTTCCGTGAGGCGGAG 40020 || || || | | |||||||| | || ||||||||| || | ||| | || Sbjct 323 TACCTATTCAGAACGCCGTGGGAGCCACTTAATTACAACTTTAGCTTTAGAGAGTCAGAA 264 Query 40021 TTAACGCTTGTTAATGGCGTGAACGGTCACGGAAAAACGGAGGTTGTCGGGCATATGGCA 40080 ||||| || | || || || || || ||||| ||||| || ||||| |||||||| Sbjct 263 TTAACCGTTCTGAACGGTGTTAATGGACACGGCAAAACAGAAGTTGTGGGGCATATTATG 204 Query 40081 CTTGAGGCCATGAGGCAGGGGGTAAAAAC------ATGCGTCGCATCGCTTGAACTGAAG 40134 ||||| || ||| | || | |||| ||||| ||||| | || || ||| Sbjct 203 CTTGAAGCAATGCGCCA------ACAAACCCGCGTTTGCGTGGCATCTTTGGAGCTCAAG 150 Query 40135 CCAGGGATTCTGCTTAAACGCCTGACCCGGCAGTCTACATGTTGCAAAATGCCGCCAGTT 40194 || ||| || | ||||| || | | || | || || | ||| ||| ||| | Sbjct 149 CCGGGGCAGCTATTAAAACGACTAATAAGACAAACAACCTGCTCTGAAAAGCCACCAATA 90 Query 40195 CTGGAAATCGAATCAGCATTTAAGTTTTACGATGACCGGCTCTGGTTATTTGGCCTGACA 40254 ||||||| || || | || | |||| ||||| || || |||||||||||||||||| Sbjct 89 ATGGAAATAGATGCATCGTTCAGTGTTTATGATGATCGCCTATGGTTATTTGGCCTGACA 30 Query 40255 GGTACAGCCAAGGCTGAACG 40274 || ||||||||||| ||||| Sbjct 29 GGAACAGCCAAGGCAGAACG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157038227449528