Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq335 123 2e-23 seq158 109 4e-19 seq796 102 6e-17 >seq335 Length=1594555 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| |||| ||||| || || || ||| || ||||||||||| ||||| Sbjct 905129 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 905070 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || || || || ||||| ||||| || || ||||| ||||| | ||| Sbjct 905069 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 905010 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| ||||| || || ||| ||| | | | ||||| |||||||| Sbjct 905009 ATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCACT 904950 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 |||| || || ||||| || ||||| ||||| ||||| ||||||||| || Sbjct 904949 TCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTTG 904899 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| |||| ||||| || || || ||| || ||||||||||| ||||| Sbjct 905357 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 905298 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || || | |||||| || ||||| ||||| ||||| || || | || Sbjct 905297 AGAGTACGTCCATCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGG 905238 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| ||||| || || || ||| | | | ||||| || || ||| Sbjct 905237 ATACCCTCTTTGTCCTGGATTTTGGCCTTGACATTTTCAATTGTGTCTGAAGCTTCGACC 905178 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || ||||| |||||||| || ||||| || ||||| Sbjct 905177 TCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 905131 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||| ||||||||||| ||||| ||| | || |||| ||||| || || || Sbjct 905777 TCTTTTTGGATATTGTAATCTGATAGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAA 905718 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||| ||||||||||| | || | || || ||||| || || ||| ||| Sbjct 905717 ATCAGACGCTGTTGATCTGGTGGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTT 905658 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| || || ||||||| || || ||||| || |||| ||| |||||| Sbjct 905657 TCAATGGTATCTGATGCTTCAACCTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACA 905598 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 905597 AAAATTTGCAT 905587 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| ||||| ||||| ||||| ||||||||||| ||| ||| |||| || | ||| Sbjct 905562 ATGGAGCGTTGATTCTTTCTGAATGTTGTAATCAGAAAGAGTTCTTCCGTCTTCAAGCTG 905503 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| ||||| ||||| || || | || | ||||| ||||| || || Sbjct 905502 CTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGGATACCCTCTTTGTCCTGGATTTT 905443 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || ||| | | | ||||| || || ||||||| || || || ||||| || Sbjct 905442 GGCCTTGACATTTTCAATTGTATCTGAAGCTTCGACCTCCAAGGTGATGGTCTTTCCAGT 905383 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 |||||| || ||||| || ||||| Sbjct 905382 CAAAGTCTTGACAAAGATTTGCAT 905359 Score = 98.7 bits (108), Expect = 8e-16 Identities = 141/196 (72%), Gaps = 7/196 (4%) Strand=Plus/Minus Query 48576 TCTTTTTGA-ATATTGTAATCAGATAGACTT----CGATCGTCGTCCAACTGCTTACCGG 48630 |||||||| || ||||||||||| || || | ||| | |||| || ||||| | Sbjct 906008 TCTTTTTGGGATGTTGTAATCAGACAGGGTTTCTGCCATCCT--TCCAGTTGTTTACCAG 905951 Query 48631 CAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTA 48690 ||||||| || || ||||| || | || | ||| || ||||| |||||| ||| | Sbjct 905950 CAAATATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTGA 905891 Query 48691 CAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTT 48750 || | | || || || ||||| || |||| ||||| || ||||| |||||||||| Sbjct 905890 CATTTTCGATAGTATCAGAAGCCTCTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTT 905831 Query 48751 TTACAAAAATCTGCAT 48766 | |||||||| ||||| Sbjct 905830 TGACAAAAATTTGCAT 905815 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || || || || | |||| ||| |||||| |||||||||||| ||||| || || Sbjct 906502 GCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA 906443 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | | | || |||| ||| ||||||||||| || || ||||| || || | || Sbjct 906442 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906383 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | ||| ||||| || ||| || || || | | || || || || || || Sbjct 906382 GATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGAC 906323 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || || || ||||| |||||||||||||| Sbjct 906322 TTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCAT 906275 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| |||| ||| |||||| |||||||||||| ||||| || || || | | Sbjct 906720 AGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAAAGGGTCCTT 906661 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||| ||||||||||| || || ||||| || || | || | ||| ||| Sbjct 906660 CCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCC 906601 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||| || || || | | || || || || || || || | || Sbjct 906600 TTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAACTTCTAAGGTG 906541 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || || ||||| || ||||||||||| Sbjct 906540 ATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503 >seq158 Length=288468 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || || | ||||| ||||| || || || ||||||||||||||||| || || Sbjct 89648 GCCTCCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGA 89589 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || || | ||||||||| || || |||| | ||| || || | ||| Sbjct 89588 CAGAGTACGTCCATCCTCGAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGG 89529 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||| ||||| |||||| || ||| | | || || || ||||| || Sbjct 89528 AATGCCCTCTTTGTCTTGAATCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAAC 89469 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | || || || || || ||||| || || ||||| |||||||| Sbjct 89468 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTAACAAAGATCTGCAT 89421 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || || || || | |||| ||| || || |||||||||||||| || || || Sbjct 89420 GCCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCGGA 89361 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || || | |||||| || || || |||| | ||| || || | ||| Sbjct 89360 CAGAGTACGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGG 89301 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||| || || || ||||| || ||| | | || || || ||||| || Sbjct 89300 AATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAAC 89241 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | || || || || || |||| ||||| || ||||||||||| Sbjct 89240 CTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCAT 89193 >seq796 Length=23603 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| || || |||||||| || | ||||| | || || ||||| || || ||||| | Sbjct 4665 CTTTCTGTATGTTGTAATCGGACAATGTTCGACCATCCTCTAACTGTTTGCCAGCAAAAA 4724 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 ||| |||||||||||| | |||| || ||||| || || || ||| ||| Sbjct 4725 TCAATCGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTT 4784 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | || ||||| || || ||||| | || || || || || ||||||||||| |||| Sbjct 4785 CTATAGTATCTGAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGACAA 4844 Query 48757 AAATCTGCATCGTG 48770 |||| ||||| ||| Sbjct 4845 AAATTTGCATTGTG 4858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380909288955654