Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq410 104 4e-17 seq409 102 2e-16 >seq410 Length=4553683 Score = 104 bits (114), Expect = 4e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||| |||||||| | || || || || | |||||| || |||||| | ||||| Sbjct 2615931 GTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAGCGAGCCTC 2615872 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | |||||||||||| | ||| | ||| | ||||||||||||||| || ||||| || Sbjct 2615871 AGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCCGA 2615812 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590 ||||||||||| || | ||||| | ||| || | ||| |||| Sbjct 2615811 GGCAGCAAAGAATGCCAAAACATGCGAGATGAAGTGCCTCTCATTGT 2615765 >seq409 Length=1876529 Score = 102 bits (112), Expect = 2e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 ||| |||||||| || | ||||| |||| | ||| | || |||||||||| |||||| Sbjct 1589063 CTTCAGCACCTTAACCCTGTCCTCGAGCCTGGAGATCCTCTCGAGTTTGCGCCTGCGGCA 1589004 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| ||||| | |||||||| | ||||| || || ||||||||| |||||| Sbjct 1589003 CTTGGACGCTGCTACGCGGTTCCTCTGCCTCTTCCGCTCGAGCTTGATGCGCTCCTGGGA 1588944 Query 241609 CTCCATGTCGATCGGAGAC 241627 |||||||||||| || ||| Sbjct 1588943 CTCCATGTCGATGGGCGAC 1588925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931461793912320