Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq410 104 4e-17 seq1 91.5 3e-13 >seq410 Length=4553683 Score = 104 bits (114), Expect = 4e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 ||||||| |||||| |||| ||||||| | | ||||| ||||||| ||| || | Sbjct 2616096 GAAGGCGAACTGGGCCCTGAACTGGATCAGTCACGATAGCGCGACGTTTGCCGAACGAGT 2616155 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 | | ||||| ||||| || ||||| |||||||||||||| ||||| ||||| ||||| Sbjct 2616156 GATTGCCTTCGCTGCAGTCGAGGGAATCTTTTTCAGCGGCAGTTTTGCTGCCATTTTCTG 2616215 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||| ||| || || ||||| || || ||| ||| || ||||| ||||| Sbjct 2616216 GCTGAAGAAGCGTGGTCTTATGCCTGGACTTACCTTCAGCAATGAACTCATTTCTAGGGA 2616275 Query 26004 CGAGG 26008 ||||| Sbjct 2616276 CGAGG 2616280 Score = 102 bits (112), Expect = 2e-16 Identities = 109/143 (76%), Gaps = 6/143 (4%) Strand=Plus/Plus Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || |||||||||||||| ||||| |||||||| || || ||||||||| ||| | ||| Sbjct 2615791 GTTTTGGCATTCTTTGCTGCCTCGGATGGTATTGTCAATGAGAATCTGGTTGAGCGTTTC 2615850 Query 25657 ACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 | | |||||||||| ||| ||||| || ||||| || |||||| ||||||| Sbjct 2615851 AGCCAGGAAGTGCAG---GTGACTGAGGCTCGCTGCTTCTATGGCTTCCAGGTGGCCATT 2615907 Query 25714 GAAAATGTGCACTCTGAGGTGTA 25736 ||||| | |||||||| |||| Sbjct 2615908 GAAAACATTCACTCTGAAATGTA 2615930 >seq1 Length=33571687 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 |||||||| | |||||| | ||| || || |||| |||||| | |||||||||| Sbjct 24628413 GGACACATTAAACTCCACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATC 24628472 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 || | || | || || ||||| | | | || || || |||| || | ||| Sbjct 24628473 CATAAAGCATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGA 24628532 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || | ||| || || |||||||| |||||||| |||| ||| | ||| | || || ||| Sbjct 24628533 TCGAGAAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGT 24628592 Query 222179 CGCTTGTTGCCACCCTGATCCAC 222201 | |||||| ||||| ||||| || Sbjct 24628593 CTCTTGTTTCCACCTTGATCGAC 24628615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928773998805120