Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq410 104 4e-17
seq1 91.5 3e-13
>seq410
Length=4553683
Score = 104 bits (114), Expect = 4e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883
||||||| |||||| |||| ||||||| | | ||||| ||||||| ||| || |
Sbjct 2616096 GAAGGCGAACTGGGCCCTGAACTGGATCAGTCACGATAGCGCGACGTTTGCCGAACGAGT 2616155
Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943
| | ||||| ||||| || ||||| |||||||||||||| ||||| ||||| |||||
Sbjct 2616156 GATTGCCTTCGCTGCAGTCGAGGGAATCTTTTTCAGCGGCAGTTTTGCTGCCATTTTCTG 2616215
Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003
||| ||| || || ||||| || || ||| ||| || ||||| |||||
Sbjct 2616216 GCTGAAGAAGCGTGGTCTTATGCCTGGACTTACCTTCAGCAATGAACTCATTTCTAGGGA 2616275
Query 26004 CGAGG 26008
|||||
Sbjct 2616276 CGAGG 2616280
Score = 102 bits (112), Expect = 2e-16
Identities = 109/143 (76%), Gaps = 6/143 (4%)
Strand=Plus/Plus
Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656
|| |||||||||||||| ||||| |||||||| || || ||||||||| ||| | |||
Sbjct 2615791 GTTTTGGCATTCTTTGCTGCCTCGGATGGTATTGTCAATGAGAATCTGGTTGAGCGTTTC 2615850
Query 25657 ACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
| | |||||||||| ||| ||||| || ||||| || |||||| |||||||
Sbjct 2615851 AGCCAGGAAGTGCAG---GTGACTGAGGCTCGCTGCTTCTATGGCTTCCAGGTGGCCATT 2615907
Query 25714 GAAAATGTGCACTCTGAGGTGTA 25736
||||| | |||||||| ||||
Sbjct 2615908 GAAAACATTCACTCTGAAATGTA 2615930
>seq1
Length=33571687
Score = 91.5 bits (100), Expect = 3e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058
|||||||| | |||||| | ||| || || |||| |||||| | ||||||||||
Sbjct 24628413 GGACACATTAAACTCCACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATC 24628472
Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118
|| | || | || || ||||| | | | || || || |||| || | |||
Sbjct 24628473 CATAAAGCATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGA 24628532
Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178
|| | ||| || || |||||||| |||||||| |||| ||| | ||| | || || |||
Sbjct 24628533 TCGAGAAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGT 24628592
Query 222179 CGCTTGTTGCCACCCTGATCCAC 222201
| |||||| ||||| ||||| ||
Sbjct 24628593 CTCTTGTTTCCACCTTGATCGAC 24628615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928773998805120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |