Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_019706.1 Length=42780 Score E Sequences producing significant alignments: (Bits) Value seq3260 318 2e-82 seq5383 253 6e-63 seq2807 239 1e-58 seq5024 185 2e-42 seq4386 116 1e-21 >seq3260 Length=833 Score = 318 bits (352), Expect = 2e-82 Identities = 503/718 (70%), Gaps = 2/718 (0%) Strand=Plus/Plus Query 557 AGCCCCGCGTCGTATGCCGGTGGCCGATGCGGTCAGTACTTATATGCGCGTGCCAATGGG 616 ||| ||| | || ||||| || || ||||| || | |||||||| || || |||| Sbjct 30 AGCACCGAGGCGAATGCCAGTTGCGGATGCTGTGGCAAAATATATGCGTGTACCTGTGGG 89 Query 617 GGCGGGAAACTCAGTTCCGTGGGATCCGGATCTGGCACCCTATGTGATTGAGCCGATGAA 676 ||||| ||||| ||||| |||||||||| | | || || | |||| || ||||| Sbjct 90 AGCGGGTAACTCGGTTCCTTGGGATCCGGCAGTATCTCCTTACATTGTTGAACCTATGAA 149 Query 677 CTGTCTGGCATCGCGTGAATACGATGCGGTGGTGTTTGTGGGCCCAGCGCGAACGGGTAA 736 ||| | | || || || ||||| ||| | |||||||| || || |||| || || Sbjct 150 TTGTTTATCGTCACGGCTCTATGATGCAGTGATATTTGTGGGTCCTGCAAGAACAGGAAA 209 Query 737 AACCATCGGGCTGATTGACGGCTGGATCGTTTATAACATTGTCTGCGATCCGGCAGATAT 796 || ||||| | ||||| |||||| | |||| || ||||| |||||||| | ||||| Sbjct 210 GACGGTCGGGTTAATTGATGGCTGGGTGATTTACAATATTGTGTGCGATCCTTCTGATAT 269 Query 797 GCTTGTAATTCAGGTATCTGAGGAAAAAGCGCGCGAGCATTCCAAAAAACGCCTGGACCG 856 | | | | || | | | || ||||| | ||||| |||||||| || || Sbjct 270 GTTGCTGGTGCAAATGACGCAAGATAAAGCACAAGAGCACAGTAAAAAACGGCTTTCTCG 329 Query 857 TACTTTTCGCTGTAGCCCTGAAGTTAAAACCCGGCTAAGCCCAAGACGTAACGATAACAA 916 || ||||| || || |||||||| | | | || || || | ||||| || || || Sbjct 330 CACCTTTCGTTGCAGTCCTGAAGTCAGTAAACAACTCAGTCCTCGTCGTAATGACAATAA 389 Query 917 CGTCTACGACCG-TACATTCCGCGCCGGTAACTATCTGAAGCTGGGCTGGCCATCCGTCA 975 ||| | || ||| || | || | | | | || |||| |||||||| | | Sbjct 390 CGTATTTGATAAATACTTTTTAT-CGGGCAGTTTTTTAAAAATGGGGTGGCCATCGATTA 448 Query 976 ATATCATGTCGTCCTCGGACTATAAAAGTGTGGCGCTGACGGATTATGACCGCTTTCCGG 1035 || | ||||| || || |||| ||| |||||||||| || ||||||||||| || || | Sbjct 449 ATGTGATGTCCTCATCTGACTTTAAGTGTGTGGCGCTCACCGATTATGACCGTTTCCCTG 508 Query 1036 AAGATATCGACGGGGAGGGGGATGCTTTTTCACTGGCATCGAAACGAACCACGACATTCA 1095 ||||||||||||| || || |||| ||||| | || || ||||| || || || || | Sbjct 509 AAGATATCGACGGTGAAGGAGATGGCTTTTCTTTAGCCTCAAAACGGACAACCACCTTTA 568 Query 1096 TGTCCTCCGGGATGACGCTGGTTGAGAGCTCGCCCGGGAGGGATATCAGAGACACAAAAT 1155 |||| | || ||||||||||| || || || || ||| | ||||| | || || |||| Sbjct 569 TGTCTGCGGGTATGACGCTGGTGGAAAGTTCTCCGGGGCGTGATATTACCGATACTAAAT 628 Query 1156 GGCGGCGCTCCACGCCCCATGAAGCCCCTCCGACCACCGGAATTTTATCGCTCTATAACC 1215 |||| || | | || || ||||| || || || || || |||||||| || ||||| | Sbjct 629 GGCGTCGTTTGTCTCCTCACGAAGCTCCGCCCACAACGGGTATTTTATCACTTTATAATC 688 Query 1216 GTGGTGACCGCCGTCGTCTTTACTGGCCATGCCCGCATTGCGGCGAATATTTCCAGCC 1273 | |||||||||||||| ||||||| ||| || || ||| ||||||||| ||||| Sbjct 689 GGGGTGACCGCCGTCGCTGGTACTGGCAATGTCCTCACTGCCACGAATATTTTCAGCC 746 >seq5383 Length=901 Score = 253 bits (280), Expect = 6e-63 Identities = 576/859 (67%), Gaps = 22/859 (3%) Strand=Plus/Minus Query 35086 CCGTACAAACGCGATGGTGAGTTGTTGCAGGTCAAGCGAATCAGCACTGAGCGCCCGGAC 35145 |||||||| || || || || || |||||||| |||||||||||||||||||| || | Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801 Query 35146 GGGAAGAAAGTCATTATGGCAGAAGGTGATTGCGAACCTTGTCTGTTCGGATGGCAGGCT 35205 || || || ||||||||||| |||| | || |||||||| || || || |||||||| Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741 Query 35206 CTGG---ACGCTGGCGTGAGGGCGGTTG-TACTTTGCGAAGGCGAAATTGATTGTATGAG 35261 || || || | ||| ||| | || || |||||||||||||| || ||||| Sbjct 740 ATGCCAAACAATG-CAAGAGTC---TTGATCCTGTGTGAAGGCGAAATTGACTGCATGAG 685 Query 35262 CTATGCGCAATACGGCATCTCGGCGTTATCCGTGCCGTTTGGTGGCGGGAAAGGCGCTAA 35321 ||| || ||||| | | || ||||| || ||||||||||| || || || || || Sbjct 684 TTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGCAAA 625 Query 35322 GCAACAGTGGATTGAGTTTGAGTATCACAACCTCGACAGGTTTGAGGAAATATTCATCTC 35381 ||| || ||||||||||| || || |||||||| || | || ||||| | | || Sbjct 624 GCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTTATC 565 Query 35382 GATGGACGTTGATGATGTTGGTCGTGAAGCCGCAAGGGAAATCGCAAGCCGACTCGGTGA 35441 | || ||||| ||||| | || |||| ||||| || || | || || || Sbjct 564 ACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGGAGA 505 Query 35442 ACATCGTTGCCGTCTTGTTACTCTGCCGTACAAAGACATCAACGAATGCCTGATGAACGG 35501 ||| ||||| || | | | | ||| | ||||| |||||||||||| | | || Sbjct 504 ACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGCTGG 445 Query 35502 TGTTACCGAGGATGAAATCTGGCAGTACATCGGCACGGCATCCTACTTTGATCCTGAAGA 35561 | || || ||||| | | | | ||| | || ||| | |||||||| ||||| || Sbjct 444 AATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGAGGA 385 Query 35562 ACTCTACAGCGCGCGAGAGTTTTACCAGGACACTATCAACGCTTTCTACGGCAAGCAGCA 35621 ||| || ||||| || || ||||| ||||| | | | || || || ||||| | || Sbjct 384 ACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGAACA 325 Query 35622 GTATCTGTTTAATCCACCGTGGGAATCTCTGGCAGATAAATTCCAGTTTCGTGAGGCCGA 35681 || || || | | |||||||| | || | || || ||| | ||| | || Sbjct 324 ATACCTATTCAGAACGCCGTGGGAGCCACTTAATTACAACTTTAGCTTTAGAGAGTCAGA 265 Query 35682 GTTGACGCTGGTCAATGGTGTGAACGGTCACGGAAAAACGGAGGTTGTCGGGCATATGGC 35741 || || | | || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct 264 ATTAACCGTTCTGAACGGTGTTAATGGACACGGCAAAACAGAAGTTGTGGGGCATATTAT 205 Query 35742 ACTTGAGGCAATGCGTCAGGGTGTGAAGACG----TGCATCGCGTCACTTGAGCTGAAGC 35797 ||||| |||||||| || || || ||| | || || | ||||| |||| Sbjct 204 GCTTGAAGCAATGCGCCA----ACAAACCCGCGTTTGCGTGGCATCTTTGGAGCTCAAGC 149 Query 35798 CTGGTATTCTCCTTAAGCGCCTTACCCGTCAGGCGACGTGCTGCAAGATGCCGCCAGTGC 35857 | || || | || || || | | || | || |||| | | ||| ||| | Sbjct 148 CGGGGCAGCTATTAAAACGACTAATAAGACAAACAACCTGCTCTGAAAAGCCACCAATAA 89 Query 35858 TGGAAATTGACTCTGCAT--TTAAAT-TTTATGACGAAAGACTTTGGGTGTTTGGCCTGA 35914 ||||||| || ||||| || | | ||||||| || | || ||| | |||||||||| Sbjct 88 TGGAAATAGA---TGCATCGTTCAGTGTTTATGATGATCGCCTATGGTTATTTGGCCTGA 32 Query 35915 CTGGAACGGCGAAAGCCGA 35933 | ||||| || || || || Sbjct 31 CAGGAACAGCCAAGGCAGA 13 >seq2807 Length=852 Score = 239 bits (264), Expect = 1e-58 Identities = 399/570 (70%), Gaps = 10/570 (2%) Strand=Plus/Plus Query 5202 CGCATATTCATGCGGGCAATGGTAACTTCGTCGCGGATGGTATTCGCCAGGCACTGATGG 5261 |||||||| | || || || || || |||||| || || | ||| | |||||| Sbjct 218 CGCATATTTACGCAGGAAACGGCAATATCGTCGGTGACAGTGTGCGCGCCTCTGTGATGG 277 Query 5262 CGCGTGCCGGGTTCGAAGG-TCAGGAGCGGGATAACGTTTATAACGGTATGACGCTGCGC 5320 |||||| |||||| ||| | | || ||||||| |||||| | ||||| ||||| Sbjct 278 CGCGTG-CGGGTTATCAGGATTATGAAAAAGATAACGCCTATAACAGCATGACACTGCGT 336 Query 5321 GAGTATG--CGCGTATGGCCCTGACTGAAAAAGGTATCGGCGTGGCCAGCTACAACCCGA 5378 |||| | |||| || | ||||| || ||| | |||||||| | || || |||| Sbjct 337 GAGTTAGCACGCGCAT--CACTGACGGAGCGTGGTGTTGGCGTGGCTACGTATAATCCGA 394 Query 5379 TGCAGATGGTTGGCCTGGCGCTGACCCACAGCACCTCTGACTTTGGCAACATTCTGCTTG 5438 |||| ||| |||| |||| | || |||||||||||||| || || || || ||||| | Sbjct 395 TGCAAATGATTGGTATGGCCTTTACGCACAGCACCTCTGATTTCGGTAATATCCTGCTGG 454 Query 5439 ATGTTGCGAACAAAGCGCTGATTCAGGGCTGGGACGAGGCGCAGGAAACCTTCGAACAGT 5498 |||| ||||| |||||| | | | || ||||| || | |||||||| | | | | Sbjct 455 ATGTCGCGAATAAAGCGATTTTGCTTGGTTGGGAAGAAAATGACGAAACCTTTGGAAAAT 514 Query 5499 GGACCAAAAAAGGCCAGCTGTCGGACTTCAAAACGGCGCATCGTGTCGGCATGGGTGGTT 5558 |||| |||||||| || || ||||| ||||| || |||||||| || | || | | Sbjct 515 GGACGAAAAAAGGACAACTCAGTGACTTTAAAACTGCACATCGTGTGGGGTTAGGGGCGT 574 Query 5559 TCCCTTCTCTGCGACAGGTTCGCGAAGGGGCTGAGTACAAGTACATCACTACCAGTGACA 5618 ||||||| | || | || || ||||| |||||||| || ||| | || | || | Sbjct 575 TCCCTTCATTACGTAAAGTGCGTGAAGGCGCTGAGTATAAATACGTTACGTTGAACGATA 634 Query 5619 AAGGCGAAACCATCGCGCTTGCCACGTATGGTGAAATCTTCTCAGTA--ACCCGCCAGGC 5676 ||||||||||||||||||| || || || |||||| | | |||||| | ||| || || Sbjct 635 AAGGCGAAACCATCGCGCTGGCAACTTACGGTGAATTAT--TCAGTATTAGCCGTCAAGC 692 Query 5677 GATCATCAACGACGATCTGAACCAGCTTACCGACGTACCGATGAAGATGGGGCGCGCGGC 5736 || ||||| || || |||| | | || || ||||| | ||| | || || || Sbjct 693 TATTATCAATGATGACATGAATATGTTGACGGATGTACCAAAGAAATTAGGTGAAGCAGC 752 Query 5737 GAAAGCAACGATTGGCGATCTGGTTTACGC 5766 |||||| || || || ||| |||| || || Sbjct 753 GAAAGCCACCATCGGTGATTTGGTGTATGC 782 >seq5024 Length=742 Score = 185 bits (204), Expect = 2e-42 Identities = 445/662 (67%), Gaps = 25/662 (4%) Strand=Plus/Plus Query 4021 TCGCTTTATAACGCGGTTTATTCGGGGCCCGTTATGCCGTGGATTGATCCCGTTAAAGAA 4080 || || | ||| |||||||| || || || ||||| ||||||||||| ||||| Sbjct 90 TCCCTGTTTAATGCGGTTTACAGTGGCCCTGTGATGCCATGGATTGATCCGAAGAAAGAG 149 Query 4081 GCGAATGCCTGGAAAACGCAGATCCGCGGCGGTGCTGCTACTGAATCCGACTGGATACGT 4140 | | || |||||||| | | ||||| ||||| | || ||| ||||||||||| Sbjct 150 TCTGAGGCTTGGAAAACCTTGTTACGCGGTGGTGCGTCAACAGAAAGTGACTGGATACGC 209 Query 4141 GCCAGCGGTCGCAACCCGGATGATGTTAAGTCACGCCGTAAAGCGGAGGTTGACGAGAAC 4200 |||| || ||||||| | ||||| || || |||||| | || ||||||| || Sbjct 210 GCCAAAGGGGGCAACCCTGCGGATGTGAAACGTCGTCGTAAAACCGAAATTGACGAAAA- 268 Query 4201 CGTGAACAG---GGACTGGTGTTTGACACCGACCCCGCCAATGATAAAGGAGGCACCAGT 4257 | ||| |||||||| ||||| || || || || ||||| ||||| ||||| || Sbjct 269 --TAAACGATTAGGACTGGTATTTGATACTGATCCTGCTAATGACAAAGG-GGCACAAGA 325 Query 4258 GCCGAAGCCA-AAGAACCGGGCGC----GCC---ACCGTCCGAAAGCCAGCGCAAAAAGT 4309 | || | | ||||| | | ||| | ||| | ||||| | || Sbjct 326 TGCTAAACAACAAGAAATCGATGATGATGCCTAAAATGTCGGG--GCCAGTAAATCAAAA 383 Query 4310 AATTCGTGGTTCCGCATGCAGGCCAGCAATAACAGCGA--GGCCGACATTTTTATCTATG 4367 || ||||| ||||||||||| | || || | | | ||| || || | ||| |||| Sbjct 384 AAGC--TGGTTTCGCATGCAGGCTA--AAGAAGACCAAACGGCGGATATCTATATTTATG 439 Query 4368 ACGAAATCGGGTACTGGGGCGTAACGGCGAAACAGTTCGTCAATGATCTCCGGGCACTTG 4427 | ||| |||| ||||| | | || | || || | ||| | | || | Sbjct 440 ATGAAGTCGGTGGGTGGGGAATTAGCGCAAGACGCTTTACGGAAGATTTAATCTCGCTGG 499 Query 4428 GGGACGTCACCCACATCAACCTTTATATCAACTCGCCAGGTGGTGATGTCTTCGACGGTA 4487 | | ||| || ||||| || |||| |||| || |||||||| || || || |||| Sbjct 500 GTAATCTCAGTCATATCAATCTGCATATTCACTCCCCCGGTGGTGAAGTGTTTGATGGTA 559 Query 4488 TTGCTATTTATAACGCGCTGAAGCACCACGGCGCGGCGATTACCGTGCATATCGACGGTC 4547 | || ||||||||| || || ||||| || | ||||| || ||||||| ||| Sbjct 560 TCGCCATTTATAACCAACTTAAAAACCACTCTGCAACAATTACGGTTTATATCGATGGTT 619 Query 4548 TCGCGGCCTCCATGGCCTCGGTGATTGCGATGGTAGGCAATCCGGTCATCATGCCTGAAA 4607 | || ||||| |||||||| || ||||||||||| || || ||||||| ||||| ||| Sbjct 620 TGGCCGCCTCAATGGCCTCAGTTATTGCGATGGTCGGGGATACGGTCATTATGCCGAAAA 679 Query 4608 ACACGATGATGATGATCCATAAGCCCTGGGG-GTTTGCTGGTGGTGACGCGAGCGATATG 4666 | | |||||||||||||| || || ||||| || | ||| || || |||| |||||| Sbjct 680 ATGCCATGATGATGATCCACAAACCGTGGGGTGTCTCATGG-GGAGATGCGAATGATATG 738 Query 4667 CG 4668 || Sbjct 739 CG 740 >seq4386 Length=1024 Score = 116 bits (128), Expect = 1e-21 Identities = 186/264 (70%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 5986 CAGTGTTAAAGGTGCAGACATCAATGCCGGGATCGTTAACCCTATCCAGAACTTTGCAGA 6045 |||||| ||||| || || | || || ||| | || ||||||| || |||| || Sbjct 144 CAGTGTAAAAGGAGCGGATGTGAACGCGAATATCATCAATCCTATCCGCAATATTGCGGA 203 Query 6046 AGTCATTGCCGAACCACGCCTGGATGA--AGC-TGATGCGAAAGCCTGGTATCTGGCTGC 6102 | || |||| || ||| | ||||| || |||| | | | ||||| |||| | Sbjct 204 GATTATCACCGAGCCGCGCTTAGATGATCAGAGTGATACCA---CGTGGTACATGGCCTC 260 Query 6103 CGCGAAGGGCACCGACACCATCGAGGTCGCTTATCTCAACGGCGTCGACACGCCATACAT 6162 || || || || |||||||| || || || ||| | || || || || | || || || Sbjct 261 GGCAAAAGGTACGGACACCATTGAAGTGGCGTATTTGAATGGTGTTGATGCACCTTATAT 320 Query 6163 CGATCAGCAGGAAGGCTTCACCACTGATGGTATCGCCACGAAAGTGCGTATTGATGCCGG 6222 || ||||| |||||||| || |||| ||| | ||||||||||||||||||||||||| Sbjct 321 TGACCAGCAAGAAGGCTTTACTTCTGACGGTGTTACCACGAAAGTGCGTATTGATGCCGG 380 Query 6223 TGTGGCGCCGCTGGACTATCGCGG 6246 ||| || ||| | || || || || Sbjct 381 TGTTGCACCGGTTGATTACCGTGG 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136764495652792