Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq3754 241 3e-59 >seq3754 Length=1116 Score = 241 bits (266), Expect = 3e-59 Identities = 484/710 (68%), Gaps = 12/710 (2%) Strand=Plus/Minus Query 2692 AAAACGAGTTATTCCCGAAAAGAACCTGATGCACATCCGGGGATTTGGCCTTGATGGTGT 2751 ||| ||||||||| ||| || ||||||| ||| | || ||||| | ||||| || Sbjct 1097 AAAGCGAGTTATTGATTCAAAAAATATGATGCATATCAGAGGGTTTGGTATGGATGGCGT 1038 Query 2752 CTGCGGCATGATGCCAATGATGACAGGTCGTGACGTGATCGGCGCGGCGATGGCCGTCGA 2811 ||||||||||| || || | ||| || |||||||| | || | | || Sbjct 1037 TTGCGGCATGATACCTATTCAAATTGGTAAAGATGTGATCGGAACCGCATTATCTACGGA 978 Query 2812 AGAATCCGCTG-CAAAGATTTTCGAAAATGGCCTGCAAAGCTCCGGGTTTCTTTCAGCTG 2870 || |||| | ||||| ||| |||||||| |||||| || || | | | Sbjct 977 TGAGGCCGCAGGCAAAGTCTTT-GAAAATGGATTGCAAACAAGTGGCTTATTAACCTCCA 919 Query 2871 ACGTGGCGCTTGATAAG---GATCAAAGAGAGCGACTTCGGGGCTATATGCAGGCCTTTA 2927 | || |||| || || || | |||||| | ||| || || ||| ||| Sbjct 918 AAACTGCA-TTGA--AGTCTGACCAGCGTGAGCGATTGCGGAAGCATTTGACGGCATTTT 862 Query 2928 CCGGTTCTAAAAACGCCGGAAAAATTATGGTTCTTGAGGGCGGGCTGAAATATCAGAACG 2987 ||||||| || || |||||||| | ||| | || || | | || || ||| || | Sbjct 861 CCGGTTCCAAGAATGCCGGAAAGGTCATGATCCTAGAAGCTGACCTATCATTTCAAAATG 802 Query 2988 TCACTATGAACCCGGAAGCAGCGCAGATGCTTGA--GTCGCGGTCGTTCAGCATCGAGGA 3045 |||| ||||| || ||| | || || || | | |||| || |||||| || ||||| Sbjct 801 TCACAATGAATCCCGAAACGGCTCAATTGTTACAAAGTCGAGG--GTTCAGTATTGAGGA 744 Query 3046 AATCTGCAGATGGTTCCGCGTACCGCCATTTATGGTCGGCCACACATCGAAACAGAGCAG 3105 |||||| | ||||| || || ||||| || ||||| || || | || || ||||| Sbjct 743 AATCTGTCGCTGGTTTCGTGTGCCGCCTTTCATGGTAGGTCATGCGGATAAGCAAAGCAG 684 Query 3106 CTGGGCATCGAGTCTTGAGGGTATGAACCTCCAGTTCCTGACGCACACCCTGCGCCCCCT 3165 |||||||||||| | || |||||||| | ||||| |||| |||| |||||||| || Sbjct 683 TTGGGCATCGAGTGTAGAAGGTATGAATATGCAGTTTTTGACTAACACACTGCGCCCGCT 624 Query 3166 GCTGGTGAACATAGAGCAGGAAATAGGACGGTGCCTGCTGGACAGCGATGATGAGGTTTT 3225 |||| || || ||||| ||||| || || ||||| ||||| ||||| || | Sbjct 623 TTTGGTCAATATTGAGCAAGAAATCAATCGTTGTCTGCTTGACAGTGATGACGATTACTA 564 Query 3226 CGCGGAGTTCTCTGTAGAAGGACTGCTGCGCGCCGACAGCGCGGGCCGTGCTGCGTACTA 3285 ||||||||| || || ||||| | | ||||| ||||| || || || | || ||||| Sbjct 563 CGCGGAGTTTTCGGTTGAAGGGTTATTACGCGCTGACAGTGCAGGTCGCTCAGCTTACTA 504 Query 3286 TACCAGTGCGCTCCAGAATGGGTGGATGTCCCGCAATGACGTGCGCCGTCTTGAGAATAT 3345 |||| || | || |||||||||||| || ||||| |||||||| | || || | Sbjct 503 CACCACCGCATTACAAAATGGGTGGATGAGTCGAAATGATGTGCGCCGATTAGAAAACTT 444 Query 3346 GCCACCGATTGAAGGGGGTGACATTTACACCGTTCAGCTCAACCTGACGC 3395 || || ||||| || || || ||||| || |||||||| || |||||| Sbjct 443 ACCCCCTATTGACGGTGGCGATATTTATACTGTTCAGCTTAATTTGACGC 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120173697141732