Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_019708.1
Length=37595
Score E
Sequences producing significant alignments: (Bits) Value
seq3754 241 3e-59
>seq3754
Length=1116
Score = 241 bits (266), Expect = 3e-59
Identities = 484/710 (68%), Gaps = 12/710 (2%)
Strand=Plus/Minus
Query 2692 AAAACGAGTTATTCCCGAAAAGAACCTGATGCACATCCGGGGATTTGGCCTTGATGGTGT 2751
||| ||||||||| ||| || ||||||| ||| | || ||||| | ||||| ||
Sbjct 1097 AAAGCGAGTTATTGATTCAAAAAATATGATGCATATCAGAGGGTTTGGTATGGATGGCGT 1038
Query 2752 CTGCGGCATGATGCCAATGATGACAGGTCGTGACGTGATCGGCGCGGCGATGGCCGTCGA 2811
||||||||||| || || | ||| || |||||||| | || | | ||
Sbjct 1037 TTGCGGCATGATACCTATTCAAATTGGTAAAGATGTGATCGGAACCGCATTATCTACGGA 978
Query 2812 AGAATCCGCTG-CAAAGATTTTCGAAAATGGCCTGCAAAGCTCCGGGTTTCTTTCAGCTG 2870
|| |||| | ||||| ||| |||||||| |||||| || || | | |
Sbjct 977 TGAGGCCGCAGGCAAAGTCTTT-GAAAATGGATTGCAAACAAGTGGCTTATTAACCTCCA 919
Query 2871 ACGTGGCGCTTGATAAG---GATCAAAGAGAGCGACTTCGGGGCTATATGCAGGCCTTTA 2927
| || |||| || || || | |||||| | ||| || || ||| |||
Sbjct 918 AAACTGCA-TTGA--AGTCTGACCAGCGTGAGCGATTGCGGAAGCATTTGACGGCATTTT 862
Query 2928 CCGGTTCTAAAAACGCCGGAAAAATTATGGTTCTTGAGGGCGGGCTGAAATATCAGAACG 2987
||||||| || || |||||||| | ||| | || || | | || || ||| || |
Sbjct 861 CCGGTTCCAAGAATGCCGGAAAGGTCATGATCCTAGAAGCTGACCTATCATTTCAAAATG 802
Query 2988 TCACTATGAACCCGGAAGCAGCGCAGATGCTTGA--GTCGCGGTCGTTCAGCATCGAGGA 3045
|||| ||||| || ||| | || || || | | |||| || |||||| || |||||
Sbjct 801 TCACAATGAATCCCGAAACGGCTCAATTGTTACAAAGTCGAGG--GTTCAGTATTGAGGA 744
Query 3046 AATCTGCAGATGGTTCCGCGTACCGCCATTTATGGTCGGCCACACATCGAAACAGAGCAG 3105
|||||| | ||||| || || ||||| || ||||| || || | || || |||||
Sbjct 743 AATCTGTCGCTGGTTTCGTGTGCCGCCTTTCATGGTAGGTCATGCGGATAAGCAAAGCAG 684
Query 3106 CTGGGCATCGAGTCTTGAGGGTATGAACCTCCAGTTCCTGACGCACACCCTGCGCCCCCT 3165
|||||||||||| | || |||||||| | ||||| |||| |||| |||||||| ||
Sbjct 683 TTGGGCATCGAGTGTAGAAGGTATGAATATGCAGTTTTTGACTAACACACTGCGCCCGCT 624
Query 3166 GCTGGTGAACATAGAGCAGGAAATAGGACGGTGCCTGCTGGACAGCGATGATGAGGTTTT 3225
|||| || || ||||| ||||| || || ||||| ||||| ||||| || |
Sbjct 623 TTTGGTCAATATTGAGCAAGAAATCAATCGTTGTCTGCTTGACAGTGATGACGATTACTA 564
Query 3226 CGCGGAGTTCTCTGTAGAAGGACTGCTGCGCGCCGACAGCGCGGGCCGTGCTGCGTACTA 3285
||||||||| || || ||||| | | ||||| ||||| || || || | || |||||
Sbjct 563 CGCGGAGTTTTCGGTTGAAGGGTTATTACGCGCTGACAGTGCAGGTCGCTCAGCTTACTA 504
Query 3286 TACCAGTGCGCTCCAGAATGGGTGGATGTCCCGCAATGACGTGCGCCGTCTTGAGAATAT 3345
|||| || | || |||||||||||| || ||||| |||||||| | || || |
Sbjct 503 CACCACCGCATTACAAAATGGGTGGATGAGTCGAAATGATGTGCGCCGATTAGAAAACTT 444
Query 3346 GCCACCGATTGAAGGGGGTGACATTTACACCGTTCAGCTCAACCTGACGC 3395
|| || ||||| || || || ||||| || |||||||| || ||||||
Sbjct 443 ACCCCCTATTGACGGTGGCGATATTTATACTGTTCAGCTTAATTTGACGC 394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120173697141732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |