Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq335 145 5e-29 seq158 127 1e-23 seq236 105 4e-17 seq138 96.9 2e-14 >seq335 Length=1594555 Score = 145 bits (160), Expect = 5e-29 Identities = 165/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || |||||||| || || |||||| | ||| ||||| | ||| ||| Sbjct 905807 CGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATCTGATAGTGTT 905748 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 || |||||| ||||||||||| || ||||| ||||| |||||||| || || || ||| Sbjct 905747 CTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGGGATACCT 905688 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 || |||||||| || || ||| ||| |||||| ||||| | || | || || || Sbjct 905687 TCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCAA-CCTCCAG 905629 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||| || |||||||| || |||||||| Sbjct 905628 AGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTG 905590 Score = 140 bits (154), Expect = 2e-27 Identities = 168/222 (76%), Gaps = 5/222 (2%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTA-GAAACATTATAATCAGCTAGAGT 480610 |||||||| || |||||||| ||||| |||||| | | || ||||||| || || Sbjct 906038 CGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATCAGACAGGGT 905979 Query 480611 T-CTGTTATC-TTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 | ||| ||| ||| ||||| || |||||||| || ||||||||||| |||||||| || Sbjct 905978 TTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGAGGGATG 905919 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTC 480727 ||||| |||||||||||||| ||||||| ||| |||||||||| | | | || | Sbjct 905918 CCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCTCTACTTCC 905859 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || || || | ||| || || |||||||| Sbjct 905858 AA-AGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTG 905818 Score = 114 bits (126), Expect = 8e-20 Identities = 160/225 (71%), Gaps = 12/225 (5%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| |||||||| || || |||||| || || ||||||| ||||| Sbjct 905580 ACGAAGTCGGAGAACAAGATGGAGCGTTGATTCTTTCTGAATGTTGTAATCAGAAAGAGT 905521 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||||| ||||| ||||||||||| ||||| || || || ||||| || || Sbjct 905520 TCTTCCGTCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGGATACC 905461 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT----- 480725 || ||||| || || || |||||| |||||| ||||| ||||| | Sbjct 905460 CTCTTTGTCCTGGATTTTGGCCTTGACATTTTCAATTGTATC------TGAAGCTTCGAC 905407 Query 480726 -TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | ||| || || || || || | |||||| || || ||||| Sbjct 905406 CTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTG 905362 Score = 107 bits (118), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||||||||| || |||||||| || || || || || || |||| || || Sbjct 906267 CGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGTGTA 906208 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||||| | ||| || |||||||| |||||||| || || || |||||||||||| Sbjct 906207 CGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGAATTCCT 906148 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || ||||| ||||| || ||| ||| |||||| || || | | ||| || Sbjct 906147 TCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTACTTCCAGA 906088 Query 480732 GTAATAGTTTTACCGGTGAGAG-TCTTAACGAAAATTTG 480769 ||||| || ||||| || |||| | || ||||||||||| Sbjct 906087 GTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTG 906049 Score = 87.8 bits (96), Expect = 1e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||| | |||||| | ||| || |||||||| |||||||| Sbjct 905085 AATATTGTAGTCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACG 905026 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 || ||||| ||||||||||| || ||||| || || || ||||||| |||||| || Sbjct 905025 CTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGT 904966 Query 480710 ATC 480712 || Sbjct 904965 GTC 904963 >seq158 Length=288468 Score = 127 bits (140), Expect = 1e-23 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| || |||||||| |||||||| ||| || || || || |||| | || Sbjct 89869 CGAAGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTG 89810 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | |||||| |||||||| ||||||||||| || | || ||||| |||||||| ||| Sbjct 89809 CGTCCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGAATACCT 89750 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || ||||||||||| || |||||| ||||| ||||||| | ||| || Sbjct 89749 TCTTTGTCTTGAATTTTAGCCTTGACATTCTCAATCGTATCAGAAGCTTCGACTTCCAGA 89690 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||| || || || |||||||| |||||||| Sbjct 89689 GTAATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTG 89652 Score = 125 bits (138), Expect = 5e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || ||||| | || || ||| ||||| || || ||||| | | ||| Sbjct 90326 ACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCGGACAAAGT 90267 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||| || ||||||||||||||||| || | ||| || ||||| || ||||| || Sbjct 90266 TCGCCCATCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGGGGAATACC 90207 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || || |||||| || || | | | | |||||| Sbjct 90206 TTCCTTGTCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCAACTTCAAG 90147 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || ||||| || | |||||| ||||| ||||| Sbjct 90146 GGTAATGGTCTTACCAGTCAAAGTCTTTACGAAGATTTG 90108 Score = 125 bits (138), Expect = 5e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || ||||| ||||| || ||| ||||| | ||| || || | ||||| Sbjct 91694 ACGAAGTCGTAGTACCAGATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGT 91635 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| || ||||||||||| ||||| | ||| || || || || ||||| || Sbjct 91634 ACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACC 91575 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || || || || || |||| | | | ||| || Sbjct 91574 TTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAG 91515 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || |||||||| ||||| ||||| Sbjct 91514 GGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTG 91476 Score = 116 bits (128), Expect = 2e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || ||||| | || || ||| ||||| | ||| || || | ||||| Sbjct 90782 ACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGT 90723 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| || ||||||||||| ||||| | ||| || || || || ||||| || Sbjct 90722 ACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACC 90663 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || || || || || |||| | | | ||| || Sbjct 90662 TTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAG 90603 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || |||||||| ||||| ||||| Sbjct 90602 GGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTG 90564 Score = 116 bits (128), Expect = 2e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || ||||| | || || ||| ||||| | ||| || || | ||||| Sbjct 91238 ACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGT 91179 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| || ||||||||||| ||||| | ||| || || || || ||||| || Sbjct 91178 ACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACC 91119 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || || || || || |||| | | | ||| || Sbjct 91118 TTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAG 91059 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || |||||||| ||||| ||||| Sbjct 91058 GGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTG 91020 Score = 86.0 bits (94), Expect = 4e-11 Identities = 145/206 (70%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| ||||||||| |||||| || ||| || || | ||||| | ||| || | Sbjct 89627 CAAG-TGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCCTCGA 89569 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 | ||||| ||||| || || | | || || || || ||||| || || |||||||||| Sbjct 89568 GCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCTTGAA 89509 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 |||| |||||| |||||||| |||| | | || |||||||| || || || Sbjct 89508 TCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAA-CCTCAAGGGTGATGGTCTTG 89450 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| | |||||||| || || || Sbjct 89449 CCGGTCAAGGTCTTAACAAAGATCTG 89424 >seq236 Length=27037145 Score = 105 bits (116), Expect = 4e-17 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 |||||||| ||| ||| ||||||| ||||||||| |||| || ||||| ||||| || Sbjct 26037672 GATTTTTCCAGTCCTAATGTTGCAAAAGAAATGCATGTTGGTCATTTGAGGTCTACCATT 26037613 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 ||||| || | || | ||| ||||| | || ||| || | || || ||| Sbjct 26037612 ATTGGAGACAGTATTGCACGTTTATTGGAATTCTTAGGTCATGATGTTCTTAGGATCAAT 26037553 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 || ||||| |||||||||||||||||||| ||| ||||||| Sbjct 26037552 CACATTGGAGATTGGGGAACACAATTTGGAATGCTAATTGC 26037512 >seq138 Length=30297376 Score = 96.9 bits (106), Expect = 2e-14 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||||||||||||||| || |||||||||||| || || | || |||||| | || || Sbjct 838204 TGCAATTGGTATTGACTTGGGAACTACTTACTCCTGCGTTGGAGTATGGCAACAAGGAAA 838145 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||| || ||||| ||||| || || || || ||||| || ||| | || || Sbjct 838144 AGTGGAAATCATCGCCAACGACCAGGGCAACAGGACGACACCCAGCTACGTTGCCTTCAC 838085 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || || | || || || ||||| || ||| | || | |||| || || | ||| Sbjct 838084 GGACACGGAGCGCCTCATCGGCGATGCCGCCAAAAACCAGGTGGCATTGAACCCCGCTAA 838025 Query 474508 TACTATTTTTGATGCTAAAAG 474528 || | || || || || || Sbjct 838024 CACAGTCTTCGACGCCAAGAG 838004 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||||||||||||||| || ||||| || ||| || || | ||||||||| | || || Sbjct 854189 TGCAATTGGTATTGACTTGGGAACCACCTACTCCTGCGTTGGAGTTTGGCAACAGGGAAA 854248 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||| || ||||| ||||| || || || || ||||| |||||| | || || Sbjct 854249 GGTGGAAATCATCGCCAACGACCAGGGCAACAGGACGACACCCAGCTATGTTACCTTCAC 854308 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAA 474480 || || || | || || || || |||||||| Sbjct 854309 GGACACGGAGCGCCTCATCGGCGACGCTGCTAA 854341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267917627192504