Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq14 145 4e-30
seq1 143 1e-29
>seq14
Length=421909
Score = 145 bits (160), Expect = 4e-30
Identities = 200/277 (72%), Gaps = 2/277 (1%)
Strand=Plus/Minus
Query 25999 ATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGC 26058
||| ||||||| ||| | ||| ||||||||||||| ||||| || |||| ||| | |||
Sbjct 276222 ATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGATAAAGAGC 276163
Query 26059 AAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118
||| ||| ||||| |||||||||||| | | | | | || | ||||| ||
Sbjct 276162 AAATGCACCAGGCCTTTTGTTTCCACCTTGATCAATAAAGCGTACTGTATTGTTGAATAC 276103
Query 26119 TTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGT 26178
| | | ||| || ||||||||| ||| |||||| || ||||| |||| | |||| |
Sbjct 276102 TCTGATCATAGGTACTAATCCATTTGCAAATCCATTATTGCTAGCAATCGCAGTTCCTTT 276043
Query 26179 CGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA 26238
| |||||||| ||| || ||||| || ||||| || |||| |||| ||||||
Sbjct 276042 AGCTCTAATATTATGAACACTTATACCAATACCACCTGCGGATTTGCTAATAATTGCACA 275983
Query 26239 A-TCTGAAACTGTATCGAAAATTCCTTTTATGCTATC 26274
||| || ||| ||||||||||||| ||| |||||
Sbjct 275982 TCTCTTTAA-TGTTTCGAAAATTCCTTCTATACTATC 275947
>seq1
Length=33571687
Score = 143 bits (158), Expect = 1e-29
Identities = 214/301 (71%), Gaps = 2/301 (1%)
Strand=Plus/Plus
Query 25924 AACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCAT 25983
|||| ||| ||| || || || || ||||| | ||||| || | ||||||||||| |
Sbjct 24628445 AACTCTCTTCATGAACAAGTCCGGGATCCATAAAGCATAGAAAAGGTCTCTCGCTCTGTT 24628504
Query 25984 TTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATG 26042
||||||||| || ||| |||||||| ||||| | || || || || || | ||||| |
Sbjct 24628505 TTCTTCTTTACCTGTG-TTCTTTTTGAGATCGAGAAATTCGAAGATGTCAGCATGCCACG 24628563
Query 26043 GTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTG 26102
|||| ||||| || ||||| || ||| || |||||||||||| ||||| | |
Sbjct 24628564 GTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACCTTGATCGACGTAACGCG 24628623
Query 26103 CAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTAT 26162
|||| | |||| | ||| | | ||| |||||||| ||| | || | |||||||||| |
Sbjct 24628624 CAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGATACACCGTTTGTGCCAG 24628683
Query 26163 GAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATT 26222
||| | || || | ||| ||| |||| || | ||| || |||||||| |||
Sbjct 24628684 AAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACCAATGCCACCAGCAGATT 24628743
Query 26223 T 26223
|
Sbjct 24628744 T 24628744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253021194225350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |