Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq14 145 4e-30 seq1 143 1e-29 >seq14 Length=421909 Score = 145 bits (160), Expect = 4e-30 Identities = 200/277 (72%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 25999 ATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGC 26058 ||| ||||||| ||| | ||| ||||||||||||| ||||| || |||| ||| | ||| Sbjct 276222 ATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGATAAAGAGC 276163 Query 26059 AAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 ||| ||| ||||| |||||||||||| | | | | | || | ||||| || Sbjct 276162 AAATGCACCAGGCCTTTTGTTTCCACCTTGATCAATAAAGCGTACTGTATTGTTGAATAC 276103 Query 26119 TTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGT 26178 | | | ||| || ||||||||| ||| |||||| || ||||| |||| | |||| | Sbjct 276102 TCTGATCATAGGTACTAATCCATTTGCAAATCCATTATTGCTAGCAATCGCAGTTCCTTT 276043 Query 26179 CGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA 26238 | |||||||| ||| || ||||| || ||||| || |||| |||| |||||| Sbjct 276042 AGCTCTAATATTATGAACACTTATACCAATACCACCTGCGGATTTGCTAATAATTGCACA 275983 Query 26239 A-TCTGAAACTGTATCGAAAATTCCTTTTATGCTATC 26274 ||| || ||| ||||||||||||| ||| ||||| Sbjct 275982 TCTCTTTAA-TGTTTCGAAAATTCCTTCTATACTATC 275947 >seq1 Length=33571687 Score = 143 bits (158), Expect = 1e-29 Identities = 214/301 (71%), Gaps = 2/301 (1%) Strand=Plus/Plus Query 25924 AACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCAT 25983 |||| ||| ||| || || || || ||||| | ||||| || | ||||||||||| | Sbjct 24628445 AACTCTCTTCATGAACAAGTCCGGGATCCATAAAGCATAGAAAAGGTCTCTCGCTCTGTT 24628504 Query 25984 TTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATG 26042 ||||||||| || ||| |||||||| ||||| | || || || || || | ||||| | Sbjct 24628505 TTCTTCTTTACCTGTG-TTCTTTTTGAGATCGAGAAATTCGAAGATGTCAGCATGCCACG 24628563 Query 26043 GTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTG 26102 |||| ||||| || ||||| || ||| || |||||||||||| ||||| | | Sbjct 24628564 GTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACCTTGATCGACGTAACGCG 24628623 Query 26103 CAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTAT 26162 |||| | |||| | ||| | | ||| |||||||| ||| | || | |||||||||| | Sbjct 24628624 CAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGATACACCGTTTGTGCCAG 24628683 Query 26163 GAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATT 26222 ||| | || || | ||| ||| |||| || | ||| || |||||||| ||| Sbjct 24628684 AAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACCAATGCCACCAGCAGATT 24628743 Query 26223 T 26223 | Sbjct 24628744 T 24628744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253021194225350