Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1 100 4e-16 >seq1 Length=33571687 Score = 100 bits (110), Expect = 4e-16 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAA- 47903 || |||||||| | ||||||||||| || | ||||| | ||||||||| | || Sbjct 14874701 TCAACATAATCCTTAGCATGTCCCCAATCTCTTTTAGCATCCAAATTTCCTAGCTCCAAT 14874642 Query 47904 ACAGTCTTGCTTACCTTCAGAG-ATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAA 47962 ||| ||||| | | | || | ||| | || || ||| || ||||| || ||||||| Sbjct 14874641 ACA-TCTTG-TAAGCCCAAGTGTATTTTTGCTATTGTTCTAGTGATCTTTCGGGTTACAA 14874584 Query 47963 AAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTC 48022 || ||||||| || |||||| |||||| ||||| || |||||| | | ||||| ||| | Sbjct 14874583 AATTTTCACCTCGCCTTGGACTTTCATGGTTAAAGAGTATACCATTGCTGGCATGCATAC 14874524 Query 48023 CGTATGATTCACGATAGTTCTTTACTATCCA 48053 | |||| || | ||||| | || ||||| Sbjct 14874523 CATATGCCTCTCTGTAGTTTATAACAATCCA 14874493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665443672689360