Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq158 138 2e-27
seq335 132 9e-26
>seq158
Length=288468
Score = 138 bits (152), Expect = 2e-27
Identities = 172/236 (73%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| ||||| || | | ||| | ||||||||||| || | ||||| ||| |||
Sbjct 90112 ATTTGCATACCTCCACGAAGTCGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTA 90053
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || || || | | ||| |||||||||||||| || || || || ||||| ||
Sbjct 90052 TAGTCTGACAATGTGCGACCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGG 89993
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || ||||| ||||| || || ||||| | || | |||| || || ||||||
Sbjct 89992 TCTGGTGGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAA 89933
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||| ||||| || || || |||||||| || || || || || || || |||||
Sbjct 89932 GCCTCGACTTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89877
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||| || | | ||||||||||| || | |||| |||||| ||| || || |||
Sbjct 90334 ATACCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCG 90275
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || |||| ||| || | ||| ||||| ||||| ||||| | ||| ||||| ||
Sbjct 90274 GACAAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGG 90215
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | |||| ||| ||| || ||||| | |||
Sbjct 90214 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCA 90155
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || ||||| || | || ||||| || ||||||||
Sbjct 90154 ACTTCAAGGGTAATGGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 90105
Score = 123 bits (136), Expect = 4e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | ||||| |||||||| | |||| ||||| |||||||||||||
Sbjct 89422 ATGCCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCG 89363
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | || || || || || || || ||||| || || ||
Sbjct 89362 GACAGAGTACGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGG 89303
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||||||||| || |||| || | ||| ||||| ||||||| ||||
Sbjct 89302 GGAATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCA 89243
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || || || || || || || || ||||| || || || ||||| ||
Sbjct 89242 ACCTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTT 89190
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||| || | | ||| ||||||||||| | |||| |||||| ||||| ||||||
Sbjct 91702 ATACCGCCACGAAGTCGTAGTACCAGATGGAGAGTAGACTCTTTCTGGATATTGTAGTCG 91643
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | ||| || | || ||||| || ||||| || | ||| || || ||
Sbjct 91642 GACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGG 91583
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | |||| || || || || || | |||
Sbjct 91582 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCA 91523
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || ||||| ||||| || || || ||||| || ||||||||
Sbjct 91522 ACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 91473
Score = 113 bits (124), Expect = 8e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
||||| |||||||| | ||| | | ||| || ||||||||||||||||| ||||| | |
Sbjct 91882 ATATTGTAGTCGGAGAGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGC 91823
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|| || || || || ||||| ||||| || || ||||| | || | |||| || |||
Sbjct 91822 TGCTGGTCTGGCGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTA 91763
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| || | ||| ||||| || || || ||||| || || | || || || || || |||
Sbjct 91762 TCAGAGGCCTCGACTTCAAGTGTGATGGTTTTGCCGGTCAAAGTCTTCACGAAGATCTGC 91703
Query 193359 AT 193360
||
Sbjct 91702 AT 91701
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||| || | | ||||||||||| || | |||| |||||| ||||| ||||||
Sbjct 90790 ATACCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCG 90731
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | ||| || | || ||||| || ||||| || | ||| || || ||
Sbjct 90730 GACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGG 90671
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | |||| || || || || || | |||
Sbjct 90670 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCA 90611
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || ||||| ||||| || || || ||||| || ||||||||
Sbjct 90610 ACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 90561
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||| || | | ||||||||||| || | |||| |||||| ||||| ||||||
Sbjct 91246 ATACCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCG 91187
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | ||| || | || ||||| || ||||| || | ||| || || ||
Sbjct 91186 GACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGG 91127
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | |||| || || || || || | |||
Sbjct 91126 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCA 91067
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || ||||| ||||| || || || ||||| || ||||||||
Sbjct 91066 ACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 91017
>seq335
Length=1594555
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||||| |||||||||||||| | || | |||||| ||| || |||||
Sbjct 906504 ATGCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCT 906445
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || || ||| || | ||||| |||||||| || | | ||| || || ||
Sbjct 906444 GAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGT 906385
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || ||||| | || | ||| ||||| ||||||| ||
Sbjct 906384 GGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCG 906325
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||||| ||||| |||||||| |||| ||||| ||||| || ||||||
Sbjct 906324 ACTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274
Score = 127 bits (140), Expect = 4e-24
Identities = 168/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||||| | || || || ||||| | || | ||| || ||| || |||||
Sbjct 906276 ATTCCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCA 906217
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | || ||||||||||| || ||||| || | | ||| || || |||
Sbjct 906216 GAAAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGA 906157
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||||||||| || || ||||||| ||| | |||| ||| || ||||| | |||
Sbjct 906156 GGAATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCT 906097
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTT-ACAAATATTTGCATT 193361
||||| ||||| || || ||||| || || |||||| || || |||||||||
Sbjct 906096 ACTTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCATT 906045
Score = 120 bits (132), Expect = 5e-22
Identities = 170/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || || ||||| | || || |||| || | || | ||| || ||||||
Sbjct 905138 ATTTGCATTCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTG 905079
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || | || | ||| ||||||||||| || ||||| || | | ||| |||
Sbjct 905078 TAGTCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGA 905019
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| ||||| ||||| || || ||||| | ||| | |||| ||| || || ||
Sbjct 905018 TCTGGAGGAATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAG 904959
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
| ||| ||||| ||||| || ||||| || || | ||||| ||||| || ||||| ||
Sbjct 904958 GCCTCCACTTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTT 904900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899585823843360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |