Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq158 138 2e-27 seq335 132 9e-26 >seq158 Length=288468 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| || | | ||| | ||||||||||| || | ||||| ||| ||| Sbjct 90112 ATTTGCATACCTCCACGAAGTCGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTA 90053 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || || | | ||| |||||||||||||| || || || || ||||| || Sbjct 90052 TAGTCTGACAATGTGCGACCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGG 89993 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || ||||| ||||| || || ||||| | || | |||| || || |||||| Sbjct 89992 TCTGGTGGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAA 89933 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||| || || || |||||||| || || || || || || || ||||| Sbjct 89932 GCCTCGACTTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89877 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| || | | ||||||||||| || | |||| |||||| ||| || || ||| Sbjct 90334 ATACCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCG 90275 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||| ||| || | ||| ||||| ||||| ||||| | ||| ||||| || Sbjct 90274 GACAAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGG 90215 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | |||| ||| ||| || ||||| | ||| Sbjct 90214 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCA 90155 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || ||||| || | || ||||| || |||||||| Sbjct 90154 ACTTCAAGGGTAATGGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 90105 Score = 123 bits (136), Expect = 4e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||| | ||||| |||||||| | |||| ||||| ||||||||||||| Sbjct 89422 ATGCCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCG 89363 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || || || || || || || ||||| || || || Sbjct 89362 GACAGAGTACGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGG 89303 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||||||||| || |||| || | ||| ||||| ||||||| |||| Sbjct 89302 GGAATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCA 89243 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || || || || || || ||||| || || || ||||| || Sbjct 89242 ACCTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTT 89190 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| || | | ||| ||||||||||| | |||| |||||| ||||| |||||| Sbjct 91702 ATACCGCCACGAAGTCGTAGTACCAGATGGAGAGTAGACTCTTTCTGGATATTGTAGTCG 91643 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| || | || ||||| || ||||| || | ||| || || || Sbjct 91642 GACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGG 91583 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | |||| || || || || || | ||| Sbjct 91582 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCA 91523 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || ||||| ||||| || || || ||||| || |||||||| Sbjct 91522 ACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 91473 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| |||||||| | ||| | | ||| || ||||||||||||||||| ||||| | | Sbjct 91882 ATATTGTAGTCGGAGAGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGC 91823 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || || || || ||||| ||||| || || ||||| | || | |||| || ||| Sbjct 91822 TGCTGGTCTGGCGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTA 91763 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || | ||| ||||| || || || ||||| || || | || || || || || ||| Sbjct 91762 TCAGAGGCCTCGACTTCAAGTGTGATGGTTTTGCCGGTCAAAGTCTTCACGAAGATCTGC 91703 Query 193359 AT 193360 || Sbjct 91702 AT 91701 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| || | | ||||||||||| || | |||| |||||| ||||| |||||| Sbjct 90790 ATACCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCG 90731 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| || | || ||||| || ||||| || | ||| || || || Sbjct 90730 GACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGG 90671 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | |||| || || || || || | ||| Sbjct 90670 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCA 90611 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || ||||| ||||| || || || ||||| || |||||||| Sbjct 90610 ACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 90561 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| || | | ||||||||||| || | |||| |||||| ||||| |||||| Sbjct 91246 ATACCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCG 91187 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| || | || ||||| || ||||| || | ||| || || || Sbjct 91186 GACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGG 91127 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | |||| || || || || || | ||| Sbjct 91126 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCA 91067 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || ||||| ||||| || || || ||||| || |||||||| Sbjct 91066 ACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 91017 >seq335 Length=1594555 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||||| |||||||||||||| | || | |||||| ||| || ||||| Sbjct 906504 ATGCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCT 906445 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || || ||| || | ||||| |||||||| || | | ||| || || || Sbjct 906444 GAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGT 906385 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || ||||| | || | ||| ||||| ||||||| || Sbjct 906384 GGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCG 906325 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||||| ||||| |||||||| |||| ||||| ||||| || |||||| Sbjct 906324 ACTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274 Score = 127 bits (140), Expect = 4e-24 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||| | || || || ||||| | || | ||| || ||| || ||||| Sbjct 906276 ATTCCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCA 906217 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | || ||||||||||| || ||||| || | | ||| || || ||| Sbjct 906216 GAAAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGA 906157 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| || || ||||||| ||| | |||| ||| || ||||| | ||| Sbjct 906156 GGAATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCT 906097 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTT-ACAAATATTTGCATT 193361 ||||| ||||| || || ||||| || || |||||| || || ||||||||| Sbjct 906096 ACTTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCATT 906045 Score = 120 bits (132), Expect = 5e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || ||||| | || || |||| || | || | ||| || |||||| Sbjct 905138 ATTTGCATTCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTG 905079 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || | ||| ||||||||||| || ||||| || | | ||| ||| Sbjct 905078 TAGTCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGA 905019 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| ||||| ||||| || || ||||| | ||| | |||| ||| || || || Sbjct 905018 TCTGGAGGAATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAG 904959 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 | ||| ||||| ||||| || ||||| || || | ||||| ||||| || ||||| || Sbjct 904958 GCCTCCACTTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTT 904900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899585823843360