Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq335 145 2e-29 seq158 136 8e-27 >seq335 Length=1594555 Score = 145 bits (160), Expect = 2e-29 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || ||||| ||||| | || || || | ||| | ||| || ||||| || ||| Sbjct 905132 ATTCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCA 905073 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| |||| || |||||||||||||||||||| | | ||| ||||| || Sbjct 905072 GAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGA 905013 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| ||||| || || |||||| ||| ||||| || | ||||| | || Sbjct 905012 GGAATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCC 904953 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| ||||| |||||||| ||||| || ||||| | ||| |||||||| || Sbjct 904952 ACTTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTT 904900 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| |||||| | || | ||| | ||| | ||||| |||||| ||||| Sbjct 905816 ATGCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATCT 905757 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| ||||| | |||| |||| ||| || || || || || | | ||||||||| ||| Sbjct 905756 GATAGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGT 905697 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||| ||||| || | |||||| | ||| Sbjct 905696 GGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCA 905637 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| |||||||||||||| | || || | ||| || ||||| Sbjct 905636 ACCTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTGCAT 905587 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || ||||| ||||| | ||| | ||| | || | |||||| || || || || Sbjct 906504 ATGCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCT 906445 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || | | |||| |||| |||||||| |||||||| | | ||| || || ||| Sbjct 906444 GAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGT 906385 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || |||||| || || || |||| || || | ||| Sbjct 906384 GGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCG 906325 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||||| || ||||||||||||||||| ||||| | ||| ||||||||| Sbjct 906324 ACTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274 Score = 122 bits (134), Expect = 2e-22 Identities = 169/233 (73%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTA-GAGATATTATAATC 192365 || ||||||| |||||| | || | ||| | || | ||||| | ||| || ||||| Sbjct 906047 ATTCCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATC 905988 Query 192366 AGATAATGTTCGTTC-ATCAT-CCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 ||| | ||| | | ||| | ||| ||||||||||||||| || | | ||||| ||| Sbjct 905987 AGACAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCA 905928 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 || || || |||||||| ||||| || || ||| ||||| |||| ||| || | Sbjct 905927 GGAGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCC 905868 Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||||| | ||||||||| || ||||| || ||||| | ||| || ||||| Sbjct 905867 TCTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||||| |||||| | || | ||| | ||| | ||| || || || || ||| Sbjct 906276 ATTCCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCA 906217 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || | || || |||||||||||||||||||| | | ||| || || || Sbjct 906216 GAAAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGA 906157 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| || || ||||| ||| ||||| || | || || | ||| Sbjct 906156 GGAATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCT 906097 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521 ||||| ||||||||||| |||||||| | ||||| Sbjct 906096 ACTTCCAGAGTAATGGTCTTACCAGTCAGAGTTTT 906062 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || | |||||| || || | ||| | || | |||||| || || || || Sbjct 906732 ATTCCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCT 906673 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || | | |||| |||| |||||||| |||||||| | | ||| || || ||| Sbjct 906672 GAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGT 906613 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || |||||| || || || |||| || || | ||| Sbjct 906612 GGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCA 906553 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || ||||||||||| ||||| ||||| | || |||||||| Sbjct 906552 ACTTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503 >seq158 Length=288468 Score = 136 bits (150), Expect = 8e-27 Identities = 176/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 192295 TTTAGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAG 192354 |||| ||||| | ||||| ||||||||||| || || || | ||| | |||||| | Sbjct 91940 TTTATATTAAT--TTCCACCCCTAAGACGTAAGACCAAGTGGAGAGTCGACTCTTTCTGG 91883 Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| || || || | || || |||| ||||||||||| || ||||||||||| | | Sbjct 91882 ATATTGTAGTCGGAGAGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGC 91823 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || || || ||||| ||||| || || |||||| || ||||| || | | Sbjct 91822 TGCTGGTCTGGCGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTA 91763 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | || ||||| || || |||||||| || || || || || | || |||||| Sbjct 91762 TCAGAGGCCTCGACTTCAAGTGTGATGGTTTTGCCGGTCAAAGTCTTCACGAAGATCTGC 91703 Query 192535 AT 192536 || Sbjct 91702 AT 91701 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 |||||||| | ||| || | ||| | || | || | || ||| || || || || || Sbjct 89878 ATACCACCGCGAAGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGA-ATGTTGTAGTC 89820 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||| ||||| ||| |||| || | ||| ||||||||||| || | ||||| ||||| || Sbjct 89819 AGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGG 89760 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || |||||||| ||||| |||||| || ||||| || | ||| || | ||| Sbjct 89759 AGGAATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTCTCAATCGTATCAGAAGCTTC 89700 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| |||||||| ||||| ||||| | || |||| ||| || ||||| Sbjct 89699 GACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTGCAT 89649 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | ||| || ||||| | ||| | || | ||||| || ||||| || Sbjct 90106 ATACCTCCACGAAGTCGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTATAGTCT 90047 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| || |||| || |||||||| ||||| ||||| || ||||| || || ||| Sbjct 90046 GACAATGTGCGACCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGT 89987 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| ||||| || || |||||| || ||||| || | || || | || Sbjct 89986 GGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCG 89927 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || ||||||||||| || | ||| |||| || |||||||| Sbjct 89926 ACTTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89877 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | ||| || | ||| || || | ||||| |||||| || || ||||| Sbjct 90334 ATACCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCG 90275 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || ||||| |||| || | ||| || |||||||||||||| | ||| ||||| || Sbjct 90274 GACAAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGG 90215 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || ||| ||||| || || | || || | ||| Sbjct 90214 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCA 90155 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || |||||||| |||||||| || || || | || || ||||| Sbjct 90154 ACTTCAAGGGTAATGGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 90105 Score = 105 bits (116), Expect = 1e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || ||||||||||| | || | ||| | |||| ||||| |||||||| || Sbjct 89422 ATGCCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCG 89363 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| |||| || | || || ||||| ||||| || ||||| || || || Sbjct 89362 GACAGAGTACGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGG 89303 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || || ||||| |||| || || | || Sbjct 89302 GGAATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCA 89243 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || || ||||| || ||||| | ||||| | || |||||||| || Sbjct 89242 ACCTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTT 89190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984403081962300