Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq335 145 2e-29
seq158 136 8e-27
>seq335
Length=1594555
Score = 145 bits (160), Expect = 2e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| || ||||| ||||| | || || || | ||| | ||| || ||||| || |||
Sbjct 905132 ATTCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCA 905073
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| |||| || |||||||||||||||||||| | | ||| ||||| ||
Sbjct 905072 GAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGA 905013
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| ||||| || || |||||| ||| ||||| || | ||||| | ||
Sbjct 905012 GGAATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCC 904953
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||||| ||||| |||||||| ||||| || ||||| | ||| |||||||| ||
Sbjct 904952 ACTTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTT 904900
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| || |||| |||||| | || | ||| | ||| | ||||| |||||| |||||
Sbjct 905816 ATGCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATCT 905757
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||| ||||| | |||| |||| ||| || || || || || | | ||||||||| |||
Sbjct 905756 GATAGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGT 905697
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| ||||| ||||| ||| ||||| || | |||||| | |||
Sbjct 905696 GGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCA 905637
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| |||||||||||||| | || || | ||| || |||||
Sbjct 905636 ACCTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTGCAT 905587
Score = 129 bits (142), Expect = 1e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| || ||||| ||||| | ||| | ||| | || | |||||| || || || ||
Sbjct 906504 ATGCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCT 906445
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || | | |||| |||| |||||||| |||||||| | | ||| || || |||
Sbjct 906444 GAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGT 906385
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| ||||| || |||||| || || || |||| || || | |||
Sbjct 906384 GGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCG 906325
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||||| || ||||||||||||||||| ||||| | ||| |||||||||
Sbjct 906324 ACTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274
Score = 122 bits (134), Expect = 2e-22
Identities = 169/233 (73%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTA-GAGATATTATAATC 192365
|| ||||||| |||||| | || | ||| | || | ||||| | ||| || |||||
Sbjct 906047 ATTCCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATC 905988
Query 192366 AGATAATGTTCGTTC-ATCAT-CCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423
||| | ||| | | ||| | ||| ||||||||||||||| || | | ||||| |||
Sbjct 905987 AGACAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCA 905928
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
|| || || |||||||| ||||| || || ||| ||||| |||| ||| || |
Sbjct 905927 GGAGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCC 905868
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|||||||| | ||||||||| || ||||| || ||||| | ||| || |||||
Sbjct 905867 TCTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815
Score = 122 bits (134), Expect = 2e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||||| |||||| | || | ||| | ||| | ||| || || || || |||
Sbjct 906276 ATTCCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCA 906217
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| || | || || |||||||||||||||||||| | | ||| || || ||
Sbjct 906216 GAAAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGA 906157
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||||||||| || || ||||| ||| ||||| || | || || | |||
Sbjct 906156 GGAATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCT 906097
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
||||| ||||||||||| |||||||| | |||||
Sbjct 906096 ACTTCCAGAGTAATGGTCTTACCAGTCAGAGTTTT 906062
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| || || | |||||| || || | ||| | || | |||||| || || || ||
Sbjct 906732 ATTCCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCT 906673
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || | | |||| |||| |||||||| |||||||| | | ||| || || |||
Sbjct 906672 GAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGT 906613
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| ||||| || |||||| || || || |||| || || | |||
Sbjct 906612 GGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCA 906553
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| || ||||||||||| ||||| ||||| | || ||||||||
Sbjct 906552 ACTTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503
>seq158
Length=288468
Score = 136 bits (150), Expect = 8e-27
Identities = 176/242 (73%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 192295 TTTAGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAG 192354
|||| ||||| | ||||| ||||||||||| || || || | ||| | |||||| |
Sbjct 91940 TTTATATTAAT--TTCCACCCCTAAGACGTAAGACCAAGTGGAGAGTCGACTCTTTCTGG 91883
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
||||| || || || | || || |||| ||||||||||| || ||||||||||| | |
Sbjct 91882 ATATTGTAGTCGGAGAGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGC 91823
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
|| || || || || ||||| ||||| || || |||||| || ||||| || | |
Sbjct 91822 TGCTGGTCTGGCGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTA 91763
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
|| || | || ||||| || || |||||||| || || || || || | || ||||||
Sbjct 91762 TCAGAGGCCTCGACTTCAAGTGTGATGGTTTTGCCGGTCAAAGTCTTCACGAAGATCTGC 91703
Query 192535 AT 192536
||
Sbjct 91702 AT 91701
Score = 131 bits (144), Expect = 3e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|||||||| | ||| || | ||| | || | || | || ||| || || || || ||
Sbjct 89878 ATACCACCGCGAAGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGA-ATGTTGTAGTC 89820
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| ||||| ||| |||| || | ||| ||||||||||| || | ||||| ||||| ||
Sbjct 89819 AGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGG 89760
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || |||||||| ||||| |||||| || ||||| || | ||| || | |||
Sbjct 89759 AGGAATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTCTCAATCGTATCAGAAGCTTC 89700
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| |||||||| ||||| ||||| | || |||| ||| || |||||
Sbjct 89699 GACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTGCAT 89649
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| || | ||| || ||||| | ||| | || | ||||| || ||||| ||
Sbjct 90106 ATACCTCCACGAAGTCGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTATAGTCT 90047
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| || |||| || |||||||| ||||| ||||| || ||||| || || |||
Sbjct 90046 GACAATGTGCGACCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGT 89987
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| ||||| || || |||||| || ||||| || | || || | ||
Sbjct 89986 GGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCG 89927
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || || ||||||||||| || | ||| |||| || ||||||||
Sbjct 89926 ACTTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89877
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| || | ||| || | ||| || || | ||||| |||||| || || |||||
Sbjct 90334 ATACCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCG 90275
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || ||||| |||| || | ||| || |||||||||||||| | ||| ||||| ||
Sbjct 90274 GACAAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGG 90215
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || ||| ||||| || || | || || | |||
Sbjct 90214 GGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCA 90155
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || |||||||| |||||||| || || || | || || |||||
Sbjct 90154 ACTTCAAGGGTAATGGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 90105
Score = 105 bits (116), Expect = 1e-17
Identities = 163/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| || ||||||||||| | || | ||| | |||| ||||| |||||||| ||
Sbjct 89422 ATGCCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCG 89363
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| |||| || | || || ||||| ||||| || ||||| || || ||
Sbjct 89362 GACAGAGTACGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGG 89303
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||||||||| || || || ||||| |||| || || | ||
Sbjct 89302 GGAATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCA 89243
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || || ||||| || ||||| | ||||| | || |||||||| ||
Sbjct 89242 ACCTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTT 89190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984403081962300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |