Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq158 136 7e-27 seq796 132 9e-26 seq335 127 4e-24 >seq158 Length=288468 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | |||||| ||||| | ||| | || | ||||| ||| ||||| ||| Sbjct 90106 ATACCTCCACGAAGTCGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTATAGTCT 90047 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || |||||||| ||||| || || || ||||| ||||| ||| Sbjct 90046 GACAATGTGCGACCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGT 89987 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || |||||| || ||||| || || || || | || Sbjct 89986 GGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCG 89927 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || ||||||||||| || | ||| |||| ||| |||||||| Sbjct 89926 ACTTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89877 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| ||||| ||||| || || || | ||| | |||||| ||||| || || || Sbjct 91927 CCACCCCTAAGACGTAAGACCAAGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCGGAG 91868 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | || ||||||||||| || ||||| ||||| | ||| ||||| || || Sbjct 91867 AGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGCGGG 91808 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||| ||||| || || |||||| || ||||| || ||||| || | || ||| Sbjct 91807 ATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGACT 91748 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || |||||||| || || || || || | ||| |||||||| Sbjct 91747 TCAAGTGTGATGGTTTTGCCGGTCAAAGTCTTCACGAAGATCTGCAT 91701 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | |||||| | ||| | || | || | || || ||| || || || Sbjct 89878 ATACCACCGCGAAGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCA 89819 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| | || || | ||| |||||||||||||| | ||||| || || || Sbjct 89818 GACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGA 89759 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| |||||| || ||||| || ||||| || | ||| Sbjct 89758 GGAATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTCTCAATCGTATCAGAAGCTTCG 89699 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| ||||| ||||| | || |||| || || ||||| Sbjct 89698 ACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTGCAT 89649 Score = 109 bits (120), Expect = 1e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||||||| || | || | ||| | |||| ||||| ||||||||| || Sbjct 89422 ATGCCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCG 89363 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || ||| | || || | || || ||||| || || || ||||| ||||| || Sbjct 89362 GACAGAGTACGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGG 89303 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| || || || ||||| ||||| || || | || Sbjct 89302 GGAATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCA 89243 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || ||||| || ||||| | ||||| | ||| |||||||| || Sbjct 89242 ACCTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTT 89190 >seq796 Length=23603 Score = 132 bits (146), Expect = 9e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| || || | ||| | || || || ||||| ||||||||||| |||| | Sbjct 4673 ATGTTGTAATCGGACAATGTTCGACCATCCTCTAACTGTTTGCCAGCAAAAATCAATCGC 4732 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 ||||| || || || || ||||| |||||||| |||||| ||| ||||| ||||||| Sbjct 4733 TGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTTCTATAGTA 4792 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| | ||| || |||| ||| ||||| || || || || ||||| | || || ||| Sbjct 4793 TCTGAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGACAAAAATTTGC 4852 Query 172068 ATT 172070 ||| Sbjct 4853 ATT 4855 >seq335 Length=1594555 Score = 127 bits (140), Expect = 4e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| || || | || || || | ||| | ||| || |||||| || || Sbjct 905132 ATTCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCA 905073 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || ||| | || || ||||||||||||||||| || | | ||| || || || Sbjct 905072 GAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGA 905013 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || |||||| ||| ||||| || || ||||| | || Sbjct 905012 GGAATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCC 904953 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| ||||| |||||||| ||||| || ||||| | || |||||||| || Sbjct 904952 ACTTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTT 904900 Score = 127 bits (140), Expect = 4e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| || || | ||| | ||| | || | |||||| ||| || || ||| Sbjct 906504 ATGCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCT 906445 Query 171900 GATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 || || | || ||| || |||| |||||||| ||||| || | | ||| ||||| || Sbjct 906444 GA-AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGG 906386 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 ||| || ||||| ||||| || |||||| || || || ||||| || || | ||| Sbjct 906385 TGGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTC 906326 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||||| || ||||||||||||||||| ||||| | || ||||||||| Sbjct 906325 GACTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||| || | || | ||| | ||| | ||||| ||||| |||||| Sbjct 905816 ATGCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATCT 905757 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | | || |||| ||| || || || ||||| | | |||||| || ||| Sbjct 905756 GATAGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGT 905697 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| ||||| ||| ||||| || |||||||| | ||| Sbjct 905696 GGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCA 905637 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| |||||||||||||| | || || | || || ||||| Sbjct 905636 ACCTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTGCAT 905587 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||| ||| || | || | ||| | ||| | ||| || ||| || || || Sbjct 906276 ATTCCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCA 906217 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || ||||||||||||||||| || | | ||| ||||| || Sbjct 906216 GAAAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGA 906157 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| || || ||||| ||| ||||| || || || || | ||| Sbjct 906156 GGAATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCT 906097 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTA-ATGTTTTAATGAATATCTGCATT 172070 ||||| ||||||||||| |||||||| | | |||| | ||| || |||||| Sbjct 906096 ACTTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCATT 906045 Score = 122 bits (134), Expect = 2e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || || | ||| || || || | ||| | || | |||||| ||| || || ||| Sbjct 906732 ATTCCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCT 906673 Query 171900 GATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 || || | || ||| || |||| |||||||| ||||| || | | ||| ||||| || Sbjct 906672 GA-AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGG 906614 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 ||| || ||||| ||||| || |||||| || || || ||||| || || | ||| Sbjct 906613 TGGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTC 906554 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| || ||||||||||| ||||| ||||| | ||| |||||||| Sbjct 906553 AACTTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503 Score = 113 bits (124), Expect = 8e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977 |||| ||||||||||||||| || | | ||||||||||| || || |||||||| ||| Sbjct 905966 TCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCT 905907 Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037 || || || ||| ||||| |||||||| || | |||||||| | ||||||||| Sbjct 905906 TGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCTCTACTTCCAAAGTAATGGTC 905847 Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| || ||||| | || || ||||| Sbjct 905846 TTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || || | |||||| | || | ||| | || | ||||| ||| || ||||| Sbjct 905588 ATGCCTCCACGAAGTCGGAGAACAAGATGGAGCGTTGATTCTTTCTGAATGTTGTAATCA 905529 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | |||| || | || || ||||||||||| | | ||| ||||| || Sbjct 905528 GAAAGAGTTCTTCCGTCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGA 905469 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| || || ||||| || ||||| || |||||||| | ||| Sbjct 905468 GGGATACCCTCTTTGTCCTGGATTTTGGCCTTGACATTTTCAATTGTATCTGAAGCTTCG 905409 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || | || ||||| || ||||| || || || | || || |||||| Sbjct 905408 ACCTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCATT 905358 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| || || | || || || | ||| | ||| || |||||| || || Sbjct 905360 ATTCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCA 905301 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || ||| | || || | || || ||||||||||| | | ||| ||||| || Sbjct 905300 GAAAGAGTACGTCCATCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGA 905241 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| || || ||||| || ||||| || || ||||| | ||| Sbjct 905240 GGGATACCCTCTTTGTCCTGGATTTTGGCCTTGACATTTTCAATTGTGTCTGAAGCTTCG 905181 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || | || ||||| || ||||| || || || | || || |||||| Sbjct 905180 ACCTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCATT 905130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905067006008400