Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_021561.1
Length=37324
Score E
Sequences producing significant alignments: (Bits) Value
seq3176 122 2e-23
>seq3176
Length=1299
Score = 122 bits (134), Expect = 2e-23
Identities = 371/569 (65%), Gaps = 12/569 (2%)
Strand=Plus/Minus
Query 32119 GTGAAAGTGCCTTGGAAATACGGCCCATACGAAACCACAGAAGAAGCGTTTAAGCGTCGC 32178
|| |||| ||||||||||| || || || | ||| ||||||||||| ||||| || ||
Sbjct 990 GTAAAAGCACCTTGGAAATATGGTCCTTATGCAACGACAGAAGAAGCATTTAAACGCCGT 931
Query 32179 GCACGTTCGCCTGAGGAATTCTCTGAAATCATCGGTCAAGACATGGCAGACGCTACAATG 32238
| ||| ||| |||||||| | | ||| || |||||| ||| || |
Sbjct 930 GGCCGTGATGTATCGGAGTTCTCTGAGTTAGTGGGTACCGATGCGGCAGATGCTTCACTA 871
Query 32239 TCAGGTTGGATTGGTTACGCATTGAATGCACTACAAGGCGCAATCGGCTCTAACGCCGGC 32298
|||| || ||| | || ||| || | ||| || ||| |||| |
Sbjct 870 GAGGGTTATATCAAATACTCTTTAGCTGCTTTAGGTGCCGCTATTGGCAATAACAAAGAA 811
Query 32299 ATGAACGTATCTGGCGAGCTTGCAACTGAAGGTAAGAAAGTTCTTACCAAAGGTTTGCGC 32358
||| || ||| || |||| || || || |||||| || |||||||| || |||
Sbjct 810 ATGGTGGTGACTGCGGATATTGCGACAGATGGCAAGAAAACACTGACCAAAGGGTTACGC 751
Query 32359 ACAATGGGCGACAAAGCATCATCTATCGC---AATCTGGGTG--ATGGATTCAACGTCTT 32413
| | || || || || | ||| |||||| || ||| | ||||| | |
Sbjct 750 AGATATGGTGATAAGT-----TCAACCGCGTAAATCTGTTTGTTATGCACTCAACCACCT 696
Query 32414 ACTTTGACATCGTTGACGAGGCGATTGACAACAAGCTTTATGAAGAAGCTGGTGTTGTGG 32473
|||| || || ||||| |||| ||||| ||||| | ||||||||||| ||||| ||
Sbjct 695 ACTTCGATATTGTTGATCAGGCCATTGATAACAAAGTGTATGAAGAAGCGGGTGTGGTTA 636
Query 32474 TTTACGGTGGTACA-CCTGGCACGCTTGGTAAGCCTGTGCTTGTTACTGACCAATGCCCA 32532
| |||||||| ||| ||||||||| | || ||||| || || || || || | |||
Sbjct 635 TCTACGGTGG-ACAGCCTGGCACGTTAGGCAAGCCCGTACTGGTAACAGATACAGCACCA 577
Query 32533 GCAACTAAGATTTTCGGTCTTGTAGCTGGCGCGGTAATGGTTACTGAGTCTCAAGCGCCT 32592
| | | || || ||| | || | || || || || | ||||| || |||| |||
Sbjct 576 GTAGATGCCATCTTTGGTTTAGTGCCGGGGGCTGTGATTATCACTGAATCCCAAGAGCCA 517
Query 32593 GGTATGCGCTCTTACCAAATCGACGACCAAGAAAACTTGGCTATCGGTTTCCGCGCTGAG 32652
| || ||||| ||||| | || | || ||||||| || |||| || | |||
Sbjct 516 ACCTTCCGATCTTATGAAATCAATGATAAGGAGAACTTGGAAATTGGTTATCGTGGTGAA 457
Query 32653 GGCACAGCTAACGTTGAAGTACTTGGCTA 32681
||| | |||||||| || || |||||
Sbjct 456 GGCGTGGTTAACGTTGGCGTTCTCGGCTA 428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119306559938936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |