Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq314 212 5e-50
seq335 120 3e-22
seq796 87.8 1e-12
seq158 86.0 5e-12
>seq314
Length=14808294
Score = 212 bits (234), Expect = 5e-50
Identities = 239/319 (75%), Gaps = 6/319 (2%)
Strand=Plus/Minus
Query 34317 CTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAG 34376
||| ||||| |||||||| || | || || | ||| |||| | |||||| || || ||
Sbjct 8692184 CTCGGTCTCGGGGTTGTCGCAATTGGGGCAGAGCACGTACTTCCTGATGAAGCCGTCGAG 8692125
Query 34377 CAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTA 34436
|| ||||| | || || |||||| |||||||||||| || || || |||||| |
Sbjct 8692124 CAAATCCTGCAGTTTGGAGGCGTCGTGACTGCCGTTGACGATAAAACGCTCATTTTTGAA 8692065
Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496
|| | ||| || || || ||||||||||| || ||| |||| ||||| || | || ||
Sbjct 8692064 GTCAAACTGGGTCTGAGCACCCAGCTCGCATCCAAAGAACTTGGTCGGATACGTAGCTGG 8692005
Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556
|| || | |||||||||| ||| ||| ||||||||||||||||| |||||||||||
Sbjct 8692004 GCGGCCGATAGCCTTGGCGACTTCAACCATATTGACGATGACAGTCTTAATGCCGTTGCC 8691945
Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC-----C 34611
|| || |||||||| || |||||||||||||||||||| ||||| || || |
Sbjct 8691944 TTTGCCCTCGACCTTCGCCTGAATGCGCGGCATTTTGTAGCGATAGAAGGCATCGCTGAC 8691885
Query 34612 GCCAC-ATTGCGGTTAACG 34629
||||| ||| |||||||
Sbjct 8691884 GCCACGATTTACGTTAACG 8691866
>seq335
Length=1594555
Score = 120 bits (132), Expect = 3e-22
Identities = 149/200 (75%), Gaps = 3/200 (2%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||||||||| || || || |||||||| | ||| ||| ||
Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| ||| | || ||| |||||| |||||||||||| | || || |||
Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGG-AGGATGCCAG-AACAATGGCGGATTACA 110450
||| | || || | ||| |||||||| |||| |||||| ||| ||| || | |||||||
Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994
Query 110451 ACAT-TCAAAAAGAATCTAC 110469
|||| ||||||||||| ||
Sbjct 905995 ACATCCCAAAAAGAATCAAC 906014
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || |||||||| |||||||| |||||||| ||| | ||| || || |
Sbjct 906503 ATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTCC 906562
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | || || || ||| || || |||||| | || || ||
Sbjct 906563 GACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCAG 906622
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | ||| ||||||||||||||||||| || || | | || ||||||
Sbjct 906623 CAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAAC 906682
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||||||||||| || ||| | || |||| || | || || || ||||
Sbjct 906683 ATTCAAAAAGAGTCCACGCTTCATCTGGTCTTGCGTCTTCGCGGAGGAA 906731
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || ||||||||||| ||||| || |||||||| ||| | ||| || ||
Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||| ||| ||| | || || || ||| || || |||||| | || || ||
Sbjct 906334 CGACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906393
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| | || || | ||| ||||||||||||||||||| || || | | || |||||
Sbjct 906394 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906453
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||||||| || ||| | || |||| | | ||| |||| ||
Sbjct 906454 CATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGG 906501
>seq796
Length=23603
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTG 110330
||||||||| |||||||||||||| || ||||| ||||| || | || || ||| |
Sbjct 4855 AATGCAAATTTTTGTCAAAACTTTGACAGGCAAGACCATAACTTTAGAGGTCGAAGCTTC 4796
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
| |||||| | | | || ||| || || || || ||||| | || ||||
Sbjct 4795 A-GATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATC 4737
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
|||| || | |||| ||| || |||||| | ||||||| ||||| || | |||||||
Sbjct 4736 AACAGCGATTGATTTTTGCTGGCAAACAGTTAGAGGATGGTCGAACATTGTCCGATTACA 4677
Query 110451 ACATTCAAAAAG 110462
|||| || ||||
Sbjct 4676 ACATACAGAAAG 4665
>seq158
Length=288468
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || ||||| || || || |||||||| ||||| ||| | || ||| ||
Sbjct 89421 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGGCTTCT 89480
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| | | | || || |||||| |||||||| ||| | ||| || ||
Sbjct 89481 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAGGGCATTCCCCCAGACCAG 89540
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | || | || ||||| ||||| ||||||| | || || | || |||||
Sbjct 89541 CAGAGGTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGACGTACTCTGTCCGACTACAAT 89600
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484
||||||||||||||||| | ||| |||| ||
Sbjct 89601 ATTCAAAAAGAATCTACACTTCACTTGGTCTT 89632
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || || |||||||||||||| || | ||| ||| || |
Sbjct 90333 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90392
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | || ||| |||||| || || ||||| | || || ||
Sbjct 90393 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90452
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | |||| || || || || || || |||| | | || || | |||||||||
Sbjct 90453 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90512
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACT 110490
||||| ||||| || || | || |||| || |||||
Sbjct 90513 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACT 90550
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || || |||||||||||||| || | ||| ||| || |
Sbjct 90789 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90848
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | || ||| |||||| || || ||||| | || || ||
Sbjct 90849 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90908
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | |||| || || || || || || |||| | | || || | |||||||||
Sbjct 90909 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90968
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACT 110490
||||| ||||| || || | || |||| || |||||
Sbjct 90969 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACT 91006
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || || |||||||||||||| || | ||| ||| || |
Sbjct 91245 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 91304
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | || ||| |||||| || || ||||| | || || ||
Sbjct 91305 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 91364
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | |||| || || || || || || |||| | | || || | |||||||||
Sbjct 91365 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 91424
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACT 110490
||||| ||||| || || | || |||| || |||||
Sbjct 91425 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACT 91462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412810917870314
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |