Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq314 212 5e-50 seq335 120 3e-22 seq796 87.8 1e-12 seq158 86.0 5e-12 >seq314 Length=14808294 Score = 212 bits (234), Expect = 5e-50 Identities = 239/319 (75%), Gaps = 6/319 (2%) Strand=Plus/Minus Query 34317 CTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAG 34376 ||| ||||| |||||||| || | || || | ||| |||| | |||||| || || || Sbjct 8692184 CTCGGTCTCGGGGTTGTCGCAATTGGGGCAGAGCACGTACTTCCTGATGAAGCCGTCGAG 8692125 Query 34377 CAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTA 34436 || ||||| | || || |||||| |||||||||||| || || || |||||| | Sbjct 8692124 CAAATCCTGCAGTTTGGAGGCGTCGTGACTGCCGTTGACGATAAAACGCTCATTTTTGAA 8692065 Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 || | ||| || || || ||||||||||| || ||| |||| ||||| || | || || Sbjct 8692064 GTCAAACTGGGTCTGAGCACCCAGCTCGCATCCAAAGAACTTGGTCGGATACGTAGCTGG 8692005 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 || || | |||||||||| ||| ||| ||||||||||||||||| ||||||||||| Sbjct 8692004 GCGGCCGATAGCCTTGGCGACTTCAACCATATTGACGATGACAGTCTTAATGCCGTTGCC 8691945 Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC-----C 34611 || || |||||||| || |||||||||||||||||||| ||||| || || | Sbjct 8691944 TTTGCCCTCGACCTTCGCCTGAATGCGCGGCATTTTGTAGCGATAGAAGGCATCGCTGAC 8691885 Query 34612 GCCAC-ATTGCGGTTAACG 34629 ||||| ||| ||||||| Sbjct 8691884 GCCACGATTTACGTTAACG 8691866 >seq335 Length=1594555 Score = 120 bits (132), Expect = 3e-22 Identities = 149/200 (75%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||||||||| || || || |||||||| | ||| ||| || Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | || ||| |||||| |||||||||||| | || || ||| Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGG-AGGATGCCAG-AACAATGGCGGATTACA 110450 ||| | || || | ||| |||||||| |||| |||||| ||| ||| || | ||||||| Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994 Query 110451 ACAT-TCAAAAAGAATCTAC 110469 |||| ||||||||||| || Sbjct 905995 ACATCCCAAAAAGAATCAAC 906014 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || |||||||| |||||||| |||||||| ||| | ||| || || | Sbjct 906503 ATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTCC 906562 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | || || || ||| || || |||||| | || || || Sbjct 906563 GACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCAG 906622 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| ||||||||||||||||||| || || | | || |||||| Sbjct 906623 CAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAAC 906682 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||||||||| || ||| | || |||| || | || || || |||| Sbjct 906683 ATTCAAAAAGAGTCCACGCTTCATCTGGTCTTGCGTCTTCGCGGAGGAA 906731 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||||||||| ||||| || |||||||| ||| | ||| || || Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| ||| ||| | || || || ||| || || |||||| | || || || Sbjct 906334 CGACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906393 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | || || | ||| ||||||||||||||||||| || || | | || ||||| Sbjct 906394 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906453 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||| || ||| | || |||| | | ||| |||| || Sbjct 906454 CATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGG 906501 >seq796 Length=23603 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTG 110330 ||||||||| |||||||||||||| || ||||| ||||| || | || || ||| | Sbjct 4855 AATGCAAATTTTTGTCAAAACTTTGACAGGCAAGACCATAACTTTAGAGGTCGAAGCTTC 4796 Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390 | |||||| | | | || ||| || || || || ||||| | || |||| Sbjct 4795 A-GATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATC 4737 Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450 |||| || | |||| ||| || |||||| | ||||||| ||||| || | ||||||| Sbjct 4736 AACAGCGATTGATTTTTGCTGGCAAACAGTTAGAGGATGGTCGAACATTGTCCGATTACA 4677 Query 110451 ACATTCAAAAAG 110462 |||| || |||| Sbjct 4676 ACATACAGAAAG 4665 >seq158 Length=288468 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || || || |||||||| ||||| ||| | || ||| || Sbjct 89421 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGGCTTCT 89480 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| | | | || || |||||| |||||||| ||| | ||| || || Sbjct 89481 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAGGGCATTCCCCCAGACCAG 89540 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | || | || ||||| ||||| ||||||| | || || | || ||||| Sbjct 89541 CAGAGGTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGACGTACTCTGTCCGACTACAAT 89600 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 ||||||||||||||||| | ||| |||| || Sbjct 89601 ATTCAAAAAGAATCTACACTTCACTTGGTCTT 89632 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || || |||||||||||||| || | ||| ||| || | Sbjct 90333 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90392 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | || ||| |||||| || || ||||| | || || || Sbjct 90393 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90452 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || || || || || || |||| | | || || | ||||||||| Sbjct 90453 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90512 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACT 110490 ||||| ||||| || || | || |||| || ||||| Sbjct 90513 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACT 90550 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || || |||||||||||||| || | ||| ||| || | Sbjct 90789 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90848 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | || ||| |||||| || || ||||| | || || || Sbjct 90849 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90908 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || || || || || || |||| | | || || | ||||||||| Sbjct 90909 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90968 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACT 110490 ||||| ||||| || || | || |||| || ||||| Sbjct 90969 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACT 91006 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || || |||||||||||||| || | ||| ||| || | Sbjct 91245 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 91304 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | || ||| |||||| || || ||||| | || || || Sbjct 91305 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 91364 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || || || || || || |||| | | || || | ||||||||| Sbjct 91365 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 91424 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACT 110490 ||||| ||||| || || | || |||| || ||||| Sbjct 91425 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACT 91462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412810917870314