Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq335 118 8e-22
seq796 86.0 5e-12
seq158 86.0 5e-12
>seq335
Length=1594555
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| |||||||||||||| ||||| || |||||||| ||| | ||| || |||
Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| ||| ||| | || || || ||| ||||| |||||| | || || ||
Sbjct 906334 CGACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906393
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | || || | ||| ||||||||||||||||| | | || | | ||||||||
Sbjct 906394 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906453
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764
||||||||| ||||| ||| | || ||||
Sbjct 906454 CATTCAAAAAGAGTCCACGCTCCATCTGGT 906483
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| |||||||| ||||| || |||||||| ||| | ||| || ||| |
Sbjct 906503 ATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTCC 906562
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| ||| | || || || ||| ||||| |||||| | || || |||
Sbjct 906563 GACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCAG 906622
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||| ||||||||||||||||| | | || | | |||||||||
Sbjct 906623 CAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAAC 906682
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|||||||| ||||| ||| | || |||| ||| | | || || ||||
Sbjct 906683 ATTCAAAAAGAGTCCACGCTTCATCTGGTCTTGCGTCTTCGCGGAGGAA 906731
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/200 (72%), Gaps = 3/200 (2%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||||||||||||||| || || || |||||||| | ||| ||||||
Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|||||| ||| | || ||| |||||| || ||||||||| | || || ||
Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGG-AGGACGCCA-AAACAATGGCGGACTACA 107733
|| | || || | ||| |||||||| |||| |||| | || |||| || | || ||||
Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994
Query 107734 ACAT-TCAAAAGGAGTCTAC 107752
|||| ||||| || || ||
Sbjct 905995 ACATCCCAAAAAGAATCAAC 906014
>seq796
Length=23603
Score = 86.0 bits (94), Expect = 5e-12
Identities = 135/192 (70%), Gaps = 1/192 (1%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||||||||||||||| |||||||| ||||| || | || || |||
Sbjct 4855 AATGCAAATTTTTGTCAAAACTTTGACAGGCAAGACCATAACTTTAGAGGTCGAAGCTTC 4796
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| | | | || ||| || || ||||| ||||| | || |||||
Sbjct 4795 AGATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCA 4736
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| || | |||| ||| || |||||| | ||||| | |||| || | || |||||
Sbjct 4735 ACAGCGATTGATTTTTGCTGGCAAACAGTTAGAGGATGGTCGAACATTGTCCGATTACAA 4676
Query 107735 CATTCA-AAAGG 107745
||| || |||||
Sbjct 4675 CATACAGAAAGG 4664
>seq158
Length=288468
Score = 86.0 bits (94), Expect = 5e-12
Identities = 140/201 (70%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||||||||| || || | || |||||||| ||||| | ||| || |||
Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || || ||| || |||||||| | || ||||||
Sbjct 89709 GATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 89768
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731
||||| || |||| ||| ||||| || || || |||||| ||| || | |||||
Sbjct 89769 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGC----ACATTGTCTGACTA 89824
Query 107732 CAACATTCAAAAGGAGTCTAC 107752
||||||||||||||| || ||
Sbjct 89825 CAACATTCAAAAGGAATCCAC 89845
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || || || ||||||||||| || | ||| |||||| |
Sbjct 90333 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90392
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | || ||| |||||| ||||| ||||| | || || |||
Sbjct 90393 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90452
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| || || || || || || || | | || || | || ||||||
Sbjct 90453 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90512
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771
||||| || ||||| || | || |||| ||||||
Sbjct 90513 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGA 90548
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || || || ||||||||||| || | ||| |||||| |
Sbjct 90789 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90848
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | || ||| |||||| ||||| ||||| | || || |||
Sbjct 90849 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90908
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| || || || || || || || | | || || | || ||||||
Sbjct 90909 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90968
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771
||||| || ||||| || | || |||| ||||||
Sbjct 90969 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGA 91004
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || || || ||||||||||| || | ||| |||||| |
Sbjct 91245 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 91304
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | || ||| |||||| ||||| ||||| | || || |||
Sbjct 91305 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 91364
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| || || || || || || || | | || || | || ||||||
Sbjct 91365 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 91424
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771
||||| || ||||| || | || |||| ||||||
Sbjct 91425 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGA 91460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398847155725522
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |