Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq335 118 8e-22 seq796 86.0 5e-12 seq158 86.0 5e-12 >seq335 Length=1594555 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| |||||||||||||| ||||| || |||||||| ||| | ||| || ||| Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| ||| ||| | || || || ||| ||||| |||||| | || || || Sbjct 906334 CGACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906393 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || || | ||| ||||||||||||||||| | | || | | |||||||| Sbjct 906394 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906453 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||||||| ||||| ||| | || |||| Sbjct 906454 CATTCAAAAAGAGTCCACGCTCCATCTGGT 906483 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| |||||||| ||||| || |||||||| ||| | ||| || ||| | Sbjct 906503 ATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTCC 906562 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | || || || ||| ||||| |||||| | || || ||| Sbjct 906563 GACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCAG 906622 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | ||| ||||||||||||||||| | | || | | ||||||||| Sbjct 906623 CAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAAC 906682 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||||| ||||| ||| | || |||| ||| | | || || |||| Sbjct 906683 ATTCAAAAAGAGTCCACGCTTCATCTGGTCTTGCGTCTTCGCGGAGGAA 906731 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||||||||||||||| || || || |||||||| | ||| |||||| Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | || ||| |||||| || ||||||||| | || || || Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGG-AGGACGCCA-AAACAATGGCGGACTACA 107733 || | || || | ||| |||||||| |||| |||| | || |||| || | || |||| Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994 Query 107734 ACAT-TCAAAAGGAGTCTAC 107752 |||| ||||| || || || Sbjct 905995 ACATCCCAAAAAGAATCAAC 906014 >seq796 Length=23603 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/192 (70%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||||||||||||||||||||| |||||||| ||||| || | || || ||| Sbjct 4855 AATGCAAATTTTTGTCAAAACTTTGACAGGCAAGACCATAACTTTAGAGGTCGAAGCTTC 4796 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | || ||| || || ||||| ||||| | || ||||| Sbjct 4795 AGATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCA 4736 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| || | |||| ||| || |||||| | ||||| | |||| || | || ||||| Sbjct 4735 ACAGCGATTGATTTTTGCTGGCAAACAGTTAGAGGATGGTCGAACATTGTCCGATTACAA 4676 Query 107735 CATTCA-AAAGG 107745 ||| || ||||| Sbjct 4675 CATACAGAAAGG 4664 >seq158 Length=288468 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/201 (70%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || || | || |||||||| ||||| | ||| || ||| Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || || || ||| || |||||||| | || |||||| Sbjct 89709 GATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 89768 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731 ||||| || |||| ||| ||||| || || || |||||| ||| || | ||||| Sbjct 89769 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGC----ACATTGTCTGACTA 89824 Query 107732 CAACATTCAAAAGGAGTCTAC 107752 ||||||||||||||| || || Sbjct 89825 CAACATTCAAAAGGAATCCAC 89845 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || || || ||||||||||| || | ||| |||||| | Sbjct 90333 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90392 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | || ||| |||||| ||||| ||||| | || || ||| Sbjct 90393 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90452 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | |||| || || || || || || || | | || || | || |||||| Sbjct 90453 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90512 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 ||||| || ||||| || | || |||| |||||| Sbjct 90513 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGA 90548 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || || || ||||||||||| || | ||| |||||| | Sbjct 90789 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90848 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | || ||| |||||| ||||| ||||| | || || ||| Sbjct 90849 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90908 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | |||| || || || || || || || | | || || | || |||||| Sbjct 90909 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90968 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 ||||| || ||||| || | || |||| |||||| Sbjct 90969 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGA 91004 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || || || ||||||||||| || | ||| |||||| | Sbjct 91245 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 91304 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | || ||| |||||| ||||| ||||| | || || ||| Sbjct 91305 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 91364 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | |||| || || || || || || || | | || || | || |||||| Sbjct 91365 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 91424 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 ||||| || ||||| || | || |||| |||||| Sbjct 91425 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGA 91460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398847155725522