Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq335 132 8e-26 seq158 100 4e-16 >seq335 Length=1594555 Score = 132 bits (146), Expect = 8e-26 Identities = 167/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || |||| || | || || ||||| || ||| | || || ||| ||| | Sbjct 905588 TGCAAATTTTTGTAAAGACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA- 905646 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| ||||||| ||| ||||| ||| |||||||| || ||||| |||||| Sbjct 905647 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905706 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | || ||||| ||||| || ||| | || ||| ||||| || ||||||| ||| Sbjct 905707 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACACTATCAGATTACAAT 905766 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || ||||||||||| ||| ||||| | || | || | ||||||| Sbjct 905767 ATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGG 905813 Score = 104 bits (114), Expect = 4e-17 Identities = 149/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| || || ||||| || |||||| | || ||||| | | Sbjct 905816 TGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCTG 905875 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||| ||| || || ||| ||||||||||| || || || |||| Sbjct 905876 ATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAAC 905935 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAG-ATGATAATAG-AACGTTAACAGATTATAA 146209 || | ||||| ||||| ||||||||| | | | ||| || ||| | | ||||| || Sbjct 905936 AACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACAA 905995 Query 146210 TAT-ACAAAAAGAATCGACTATCCAT 146234 || ||||||||||| || ||||| Sbjct 905996 CATCCCAAAAAGAATCAACACTCCAT 906021 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || || | ||||| || || || ||||| || ||| | || || || | | | Sbjct 904904 TGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGCCTCA- 904962 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||| ||| |||||| || ||||| || ||||| || ||||| Sbjct 904963 GACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCAGATCAG 905022 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | || || ||||| |||||||||||||| ||| | || | | || || ||| Sbjct 905023 CAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTACAAT 905082 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || || || || || ||| | || || || | || |||||||||| Sbjct 905083 ATTCAGAAGGAGTCAACTCTTCACTTGGTCCTGCGTCTAAGAGGAGG 905129 >seq158 Length=288468 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || ||| | || || ||||| || || |||| || || | || Sbjct 89878 TGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCCG 89937 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || |||||| || ||||| || || ||||| || || | Sbjct 89938 ACACGATCGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCACCAGACCAGC 89997 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || || || || ||||||||||| ||| | | || || |||| ||||| | Sbjct 89998 AGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGTCGCACATTGTCAGACTATAACA 90057 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | ||| | ||||| ||| | | ||||||| Sbjct 90058 TTCAAAAAGAATCCACGCTGCATCTGGTATTGCGACTTCGTGGAGGTA 90105 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || |||||||||||| | || || ||| | | Sbjct 89650 TGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCTG 89709 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || |||||| ||| |||||||| ||||| || ||||| | Sbjct 89710 ATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAGC 89769 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| ||||| ||| | || ||| | || || | || || || | Sbjct 89770 AGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAACA 89829 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| ||||| || Sbjct 89830 TTCAAAAGGAATCCAC 89845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786106474466160