Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq335 132 8e-26
seq158 100 4e-16
>seq335
Length=1594555
Score = 132 bits (146), Expect = 8e-26
Identities = 167/227 (74%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
||||||| || |||| || | || || ||||| || ||| | || || ||| ||| |
Sbjct 905588 TGCAAATTTTTGTAAAGACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA- 905646
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||| ||| ||||||| ||| ||||| ||| |||||||| || ||||| ||||||
Sbjct 905647 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905706
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| | || ||||| ||||| || ||| | || ||| ||||| || ||||||| |||
Sbjct 905707 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACACTATCAGATTACAAT 905766
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
|| ||||||||||| ||| ||||| | || | || | |||||||
Sbjct 905767 ATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGG 905813
Score = 104 bits (114), Expect = 4e-17
Identities = 149/206 (72%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | ||||| || || ||||| || |||||| | || ||||| | |
Sbjct 905816 TGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCTG 905875
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
||||||| ||||||| ||| || || ||| ||||||||||| || || || ||||
Sbjct 905876 ATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAAC 905935
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAG-ATGATAATAG-AACGTTAACAGATTATAA 146209
|| | ||||| ||||| ||||||||| | | | ||| || ||| | | ||||| ||
Sbjct 905936 AACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACAA 905995
Query 146210 TAT-ACAAAAAGAATCGACTATCCAT 146234
|| ||||||||||| || |||||
Sbjct 905996 CATCCCAAAAAGAATCAACACTCCAT 906021
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
|||| || || | ||||| || || || ||||| || ||| | || || || | | |
Sbjct 904904 TGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGCCTCA- 904962
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| || ||| ||||||| ||| |||||| || ||||| || ||||| || |||||
Sbjct 904963 GACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCAGATCAG 905022
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| | || || ||||| |||||||||||||| ||| | || | | || || |||
Sbjct 905023 CAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTACAAT 905082
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
|| || || || || ||| | || || || | || ||||||||||
Sbjct 905083 ATTCAGAAGGAGTCAACTCTTCACTTGGTCCTGCGTCTAAGAGGAGG 905129
>seq158
Length=288468
Score = 100 bits (110), Expect = 4e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || ||| | || || ||||| || || |||| || || | ||
Sbjct 89878 TGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCCG 89937
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| || |||||| || ||||| || || ||||| || || |
Sbjct 89938 ACACGATCGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCACCAGACCAGC 89997
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || | || || || || ||||||||||| ||| | | || || |||| ||||| |
Sbjct 89998 AGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGTCGCACATTGTCAGACTATAACA 90057
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| || | ||| | ||||| ||| | | |||||||
Sbjct 90058 TTCAAAAAGAATCCACGCTGCATCTGGTATTGCGACTTCGTGGAGGTA 90105
Score = 96.9 bits (106), Expect = 5e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || | || || |||||||||||| | || || ||| | |
Sbjct 89650 TGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCTG 89709
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| || |||||| ||| |||||||| ||||| || ||||| |
Sbjct 89710 ATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAGC 89769
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || |||||||| ||||| ||| | || ||| | || || | || || || |
Sbjct 89770 AGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAACA 89829
Query 146212 TACAAAAAGAATCGAC 146227
| ||||| ||||| ||
Sbjct 89830 TTCAAAAGGAATCCAC 89845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786106474466160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |