Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq236 100 2e-15 >seq236 Length=27037145 Score = 100 bits (110), Expect = 2e-15 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 637126 GTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACT 637185 || |||| ||| ||| ||| |||| |||||||||||| |||| ||||| || || || Sbjct 26037675 GTGGATTTTTCCAGTCCTAATGTTGCAAAAGAAATGCATGTTGGTCATTTGAGGTCTACC 26037616 Query 637186 ATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATT 637245 |||||||| || |||| | |||| ||| | | || || |||||| | | || Sbjct 26037615 ATTATTGGAGACAGTATTGCACGTTTATTGGAATTCTTAGGTCATGATGTTCTTAGGATC 26037556 Query 637246 AATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCT 637290 ||||| | || ||||||||||| ||||| || ||| |||||||| Sbjct 26037555 AATCACATTGGAGATTGGGGAACACAATTTGGAATGCTAATTGCT 26037511 Score = 89.7 bits (98), Expect = 4e-12 Identities = 235/358 (66%), Gaps = 3/358 (1%) Strand=Plus/Plus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||| || ||||||||||| | ||| | || || || || | ||| | ||| Sbjct 16251146 TCAAAGTCCTCACCTCCCAAGTGAGTGTCACCGTTGGTGGCAACGACCTCGAAGACTCCG 16251205 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | || | | || |||| | |||||| ||| |||||||||| || || | || || Sbjct 16251206 TTGTCGATGGTCAGAAGACTGACATCAAAGGTACCACCACCCAAGTCGAAGACGAGAACG 16251265 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 ||| | ||| ||| || || |||||||| || || | || || || || || || Sbjct 16251266 TTCTTCTCTCCGTC---CTTCTTGTCAAGACCGTAAGCGATGGCGGCGGCGGTGGGCTCG 16251322 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || || || |||| || | ||||| | || |||| ||||| || |||||||| | Sbjct 16251323 TTGATGATCCTCATCACCTGGAGACCGGAGATGATTCCGGCATCCTTGGTGGCTTGCCGC 16251382 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || | ||||| || || ||||| || || | ||||| | || || | || || | Sbjct 16251383 TGAGCGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAGG 16251442 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 ||||| || |||| ||||| || | | || ||| | || |||| || |||| Sbjct 16251443 TAAGCCTCCGCGGTTTCCTTCATCTTTCCAAGAACCATAGCAGAGATTTCCTCAGGAG 16251500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740331013970148