Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq337 91.5 3e-13 >seq337 Length=921547 Score = 91.5 bits (100), Expect = 3e-13 Identities = 171/246 (70%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 182959 AATGATCCTAGAAAGTATATCTATTCTATTAAAC-AACTCGAAAAGGCAGAAACACATGA 183017 |||||| ||| | ||||| ||| | ||| ||| || | ||||| | | ||| ||||| Sbjct 71098 AATGATAAAAGAGACTATATTTATAC-ATTGAACGAATTGGAAAATGGATTAACTCATGA 71040 Query 183018 CCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTT 183077 | | ||||||||| | ||||||| | | | ||||||||||| || | ||| | Sbjct 71039 TGATTTGTGGAATGCAGCTGAAATACAATTAGTAAAGGAAGGAAAAATCCACGGATTTCT 70980 Query 183078 ACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAG 183137 ||||||| ||||||||||| || | |||||||| ||| || || ||||| || | Sbjct 70979 TAGAATGTATTGGGCTAAAAAAATTTTAGAATGGACTGAAACACCAGATGATGCCTTAAA 70920 Query 183138 TTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACG-GATCCTAACGGATACG 183196 | || ||| |||| ||||||| | || || ||| ||||| || ||||| | Sbjct 70919 GTGGTCAATTTATCTGAATGATAAGTATAGTATGGATGG-ACGTGATCCGAATGGATATG 70861 Query 183197 TAGGTT 183202 |||||| Sbjct 70860 TAGGTT 70855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903342337481280