Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 5e-15
seq413 95.1 2e-14
seq138 95.1 2e-14
>seq1
Length=33571687
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 12182283 AGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 12182224
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 12182223 TCCCCGCCGGGGAGG 12182209
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 12182281 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 12182222
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 12182221 CCCGCCGGGGAG 12182210
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 12182210 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12182269
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 12182270 TACTACCGAGGACTT 12182284
>seq413
Length=1723044
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1707122 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1707063
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1707062 CCCGCCGGGGAG 1707051
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1707122 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1707063
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 1707062 CCCGCCGGGGAGG 1707050
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1707051 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1707110
Query 139413 TACTAACGAGGAT 139425
||||| |||||||
Sbjct 1707111 TACTACCGAGGAT 1707123
>seq138
Length=30297376
Score = 95.1 bits (104), Expect = 2e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 11725 CCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTC 11783
|| |||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||
Sbjct 23152902 CCAAGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 23152961
Query 11784 GATTCCCCGACGAGGAG 11800
||||||||| || ||||
Sbjct 23152962 GATTCCCCGCCGGGGAG 23152978
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 23152907 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 23152966
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 23152967 CCCGCCGGGGAG 23152978
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 23152978 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 23152919
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 23152918 TACTACCGAGGACTT 23152904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652795036905120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |