Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_024451.1
Length=220222
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 1e-28
>seq1
Length=33571687
Score = 141 bits (156), Expect = 1e-28
Identities = 147/192 (77%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 140500 AACTAT--CTAATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTTTAAAAGA 140557
|||||| | || ||||| | ||||||||| | ||| | ||||||||||| | |||||
Sbjct 3114509 AACTATTACAAACTTTTGCCTGGGAAAACACTTATCATGCGAAAACGATCTGCTGAAAGA 3114450
Query 140558 TCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTAGG 140617
||| | || ||||| || |||||||| || |||||| | | || ||||||||| ||||
Sbjct 3114449 TCAGAGAGGATCTCCAGCTTATATTTCGCCAGATGTTTTATGTGGCAAACCATATCTAGG 3114390
Query 140618 TAAACCGTCTGATATGTGGGCGCTTGGAGTAACATTGTATACCATGTTGTTTGGGCAATT 140677
|| || || ||||||||||| | ||||| | |||| || ||| | ||||| |||||
Sbjct 3114389 AAAGCCCTCCGATATGTGGGCTTTAGGAGTTGTACTGTACACTATGCTATTTGGACAATT 3114330
Query 140678 TCCATTTTATGA 140689
||||||||| ||
Sbjct 3114329 TCCATTTTACGA 3114318
Score = 104 bits (114), Expect = 3e-17
Identities = 136/188 (72%), Gaps = 3/188 (2%)
Strand=Plus/Minus
Query 127371 TTACGAACTTTTGGCTGGGAGAAATCTTAAAA---GAAGAAGAGTTTATATTAGAACAGC 127427
|||| |||||||| |||||| || |||| | ||| | || | | ||| |||
Sbjct 3114504 TTACAAACTTTTGCCTGGGAAAACACTTATCATGCGAAAACGATCTGCTGAAAGATCAGA 3114445
Query 127428 GAGGATCACCGGCATACATCTCCCCAGAAGTTATATCAGGTAAAAAATATTTAGCAAAAC 127487
||||||| || || || || || ||||| ||| ||| || ||| |||| ||| ||| |
Sbjct 3114444 GAGGATCTCCAGCTTATATTTCGCCAGATGTTTTATGTGGCAAACCATATCTAGGAAAGC 3114385
Query 127488 CGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTACGGACAATTTCCAT 127547
| || ||| | |||||| |||||||| | | || || ||||| | |||||||||||||
Sbjct 3114384 CCTCCGATATGTGGGCTTTAGGAGTTGTACTGTACACTATGCTATTTGGACAATTTCCAT 3114325
Query 127548 TTTATGAC 127555
|||| |||
Sbjct 3114324 TTTACGAC 3114317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 704528693206560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |