Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq236 107 5e-18 seq14 93.3 1e-13 seq276 91.5 3e-13 >seq236 Length=27037145 Score = 107 bits (118), Expect = 5e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353 ||||| ||| || ||||| ||||| ||| || || ||||| ||||| || || Sbjct 20850557 GATATAGTTGAGAGGCATTTACATGACGGAGATGTTGTACTTTTCAACAGGCAGCCTTCT 20850616 Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGA-CATTTCG 305412 || || || || ||| |||||||| |||| ||||||| || | | || ||||| | Sbjct 20850617 CTACACAAGTTGAGTATAATGGCTCACAAAGCCAAAGTACTAGA-GAACAGAACATTTAG 20850675 Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472 ||| |||| | ||| ||||| ||||||||||| || ||||| || |||||||||||| | Sbjct 20850676 ATTTAATGAATGTGTCTGTACACCTTATAATGCTGACTTTGACGGCGATGAAATGAATCT 20850735 Query 305473 GCATGTACCTCAA 305485 ||| | || ||| Sbjct 20850736 TCATTTGCCACAA 20850748 >seq14 Length=421909 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111 || |||||||||||||||||||||||||||| | ||||||||||| ||||| |||| Sbjct 276638 AAGCACAAGTTGAAACTGGAACTCCTTATATGCTCTATAAAGATCACTGCAATCGTAAAT 276697 Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 | |||||| ||| | ||||| ||||| |||||||| ||| Sbjct 276698 CAAATCAACAAAATCTTGGAACTATTAAAAGCAGTAATTTATGC 276741 >seq276 Length=1331658 Score = 91.5 bits (100), Expect = 3e-13 Identities = 188/277 (68%), Gaps = 27/277 (10%) Strand=Plus/Plus Query 72258 GTTAGCCATAGAAACCAAACCTGCTTCTGAATGCTTTAATAAGAAATTCTCATCTTCAAA 72317 ||||||||| |||| | ||||| ||| ||||| || |||||||| |||| Sbjct 589949 GTTAGCCATTGAAAGAAGACCTGGCGAGTCATGTTTTAAGGCAAAGTTCTCATCCGCAAA 590008 Query 72318 AGTTTCTCCATATATACTTTGACCTGAGCTTCCATCAAAGTTCACAATATCACCTCCTTG 72377 ||| ||||||| |||||| | || | | |||||| ||||||| ||| || | ||| Sbjct 590009 AGTACCTCCATAAATACTTGTAACTCCGGTGCCATCACCATTCACAAAATCTCCACTTTG 590068 Query 72378 AACCATAAAATTATTAATTACTCTATG---GAAAG-------GAA--CAGATGCATA-TC 72424 || |||||||| || ||||||||||| || || ||| | ||| ||| || Sbjct 590069 AATCATAAAATCTTTTATTACTCTATGAAAGATAGTACCTTTGAATCCTAATG-ATACTC 590127 Query 72425 TACCATTTT------------TACAAAGTTGATAAAAATTTTCTGAAGTTTTTGGAACAA 72472 | | |||| |||||| ||| |||||||||||||||||| ||| || Sbjct 590128 CATCCTTTTTATATTCTCCTGTACAAAATTGCCGAAAATTTTCTGAAGTTTTCGGACAAA 590187 Query 72473 TATCATCAAATAATTCAATAACGATTCTACCATATTT 72509 ||| ||||| | |||| || ||||| ||| |||| Sbjct 590188 CATCTTCAAAGAGCTCAAAAATCATTCTTCCA-ATTT 590223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186720073574178