Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq236 107 5e-18
seq14 93.3 1e-13
seq276 91.5 3e-13
>seq236
Length=27037145
Score = 107 bits (118), Expect = 5e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353
||||| ||| || ||||| ||||| ||| || || ||||| ||||| || ||
Sbjct 20850557 GATATAGTTGAGAGGCATTTACATGACGGAGATGTTGTACTTTTCAACAGGCAGCCTTCT 20850616
Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGA-CATTTCG 305412
|| || || || ||| |||||||| |||| ||||||| || | | || ||||| |
Sbjct 20850617 CTACACAAGTTGAGTATAATGGCTCACAAAGCCAAAGTACTAGA-GAACAGAACATTTAG 20850675
Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472
||| |||| | ||| ||||| ||||||||||| || ||||| || |||||||||||| |
Sbjct 20850676 ATTTAATGAATGTGTCTGTACACCTTATAATGCTGACTTTGACGGCGATGAAATGAATCT 20850735
Query 305473 GCATGTACCTCAA 305485
||| | || |||
Sbjct 20850736 TCATTTGCCACAA 20850748
>seq14
Length=421909
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111
|| |||||||||||||||||||||||||||| | ||||||||||| ||||| ||||
Sbjct 276638 AAGCACAAGTTGAAACTGGAACTCCTTATATGCTCTATAAAGATCACTGCAATCGTAAAT 276697
Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
| |||||| ||| | ||||| ||||| |||||||| |||
Sbjct 276698 CAAATCAACAAAATCTTGGAACTATTAAAAGCAGTAATTTATGC 276741
>seq276
Length=1331658
Score = 91.5 bits (100), Expect = 3e-13
Identities = 188/277 (68%), Gaps = 27/277 (10%)
Strand=Plus/Plus
Query 72258 GTTAGCCATAGAAACCAAACCTGCTTCTGAATGCTTTAATAAGAAATTCTCATCTTCAAA 72317
||||||||| |||| | ||||| ||| ||||| || |||||||| ||||
Sbjct 589949 GTTAGCCATTGAAAGAAGACCTGGCGAGTCATGTTTTAAGGCAAAGTTCTCATCCGCAAA 590008
Query 72318 AGTTTCTCCATATATACTTTGACCTGAGCTTCCATCAAAGTTCACAATATCACCTCCTTG 72377
||| ||||||| |||||| | || | | |||||| ||||||| ||| || | |||
Sbjct 590009 AGTACCTCCATAAATACTTGTAACTCCGGTGCCATCACCATTCACAAAATCTCCACTTTG 590068
Query 72378 AACCATAAAATTATTAATTACTCTATG---GAAAG-------GAA--CAGATGCATA-TC 72424
|| |||||||| || ||||||||||| || || ||| | ||| ||| ||
Sbjct 590069 AATCATAAAATCTTTTATTACTCTATGAAAGATAGTACCTTTGAATCCTAATG-ATACTC 590127
Query 72425 TACCATTTT------------TACAAAGTTGATAAAAATTTTCTGAAGTTTTTGGAACAA 72472
| | |||| |||||| ||| |||||||||||||||||| ||| ||
Sbjct 590128 CATCCTTTTTATATTCTCCTGTACAAAATTGCCGAAAATTTTCTGAAGTTTTCGGACAAA 590187
Query 72473 TATCATCAAATAATTCAATAACGATTCTACCATATTT 72509
||| ||||| | |||| || ||||| ||| ||||
Sbjct 590188 CATCTTCAAAGAGCTCAAAAATCATTCTTCCA-ATTT 590223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186720073574178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |