Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq158 131 1e-25 seq335 120 2e-22 seq796 100 2e-16 >seq158 Length=288468 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | |||||| ||||| || ||||| |||||| || || ||||| |||||| Sbjct 91927 CCACCCCTAAGACGTAAGACCAAGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCGGAG 91868 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||||||||||||||||||| || ||||||||||| ||| |||| Sbjct 91867 AGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGCGGG 91808 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||||| | | |||| || | || || | || || Sbjct 91807 ATTCCCTCTTTGTCCTGGATTTT-AGCCTTGACATTTTCGATCGTATCAGAGGCCTCGAC 91749 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| ||||| || || || || || || |||||||||||| Sbjct 91748 TTCAAGTGTGATGGTTTTGCCGGTCAAAGTCTTCACGAAGATCTGCATA 91700 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || |||| ||| || ||| |||||||| ||||| || || || | |||||| | Sbjct 90091 CGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCA 90032 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || ||||||||||| || || ||||| | |||||| ||| | || | || |||||| Sbjct 90031 TCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCTTTG 89972 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || |||||| ||| |||| || | |||||| | || || |||| ||||| Sbjct 89971 TCCTGAATTTTAGCCTTC-ACATTTTCGATCGTGTCGGAAGCCTCGACTTCAAGTGTGAT 89913 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||||||| || | || || || |||||||||||| Sbjct 89912 GGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCATA 89876 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || |||||||| |||||| |||||| || |||||||||||||| || || || | || Sbjct 90544 AAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCT 90485 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || | ||| ||||| || |||||||| | |||||| ||| | || | |||||| || || Sbjct 90484 TCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATCC 90425 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||| || | || || | || | ||| ||| | || || || | ||||| || Sbjct 90424 TGAATCTT-GGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 90366 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || || || || || || |||||||||||| Sbjct 90365 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 90332 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || |||||||| |||||| |||||| || |||||||||||||| || || || | || Sbjct 91000 AAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCT 90941 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || | ||| ||||| || |||||||| | |||||| ||| | || | |||||| || || Sbjct 90940 TCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATCC 90881 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||| || | || || | || | ||| ||| | || || || | ||||| || Sbjct 90880 TGAATCTT-GGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 90822 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || || || || || || |||||||||||| Sbjct 90821 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 90788 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || |||||||| |||||| |||||| || |||||||||||||| || || || | || Sbjct 91456 AAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCT 91397 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || | ||| ||||| || |||||||| | |||||| ||| | || | |||||| || || Sbjct 91396 TCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATCC 91337 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||| || | || || | || | ||| ||| | || || || | ||||| || Sbjct 91336 TGAATCTT-GGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 91278 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || || || || || || |||||||||||| Sbjct 91277 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 91244 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || ||||| |||||| || |||||||||||||| | || || | || || Sbjct 90313 ACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCGGACAAAGTTCGCCCATCCTCG 90254 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| ||||| ||||| || ||||||||||||||| | || | |||||| ||||| Sbjct 90253 AGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGG 90194 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | | || | || | |||||| | ||| || |||| || || || || Sbjct 90193 ATCTT-AGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCAACTTCAAGGGTAATGGTCTT 90135 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || || || ||||| ||||| |||||| Sbjct 90134 ACCAGTCAAAGTCTTTACGAAGATTTGCATA 90104 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| || ||||| || || || |||||||| || ||||| ||||| Sbjct 89647 CCTCCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAC 89588 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| | || || | || || || || || ||||| | |||||| ||| | || Sbjct 89587 AGAGTACGTCCATCCTCGAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 89528 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||| || | | |||| || | ||||| | || || Sbjct 89527 ATGCCCTCTTTGTCTTGAATCTT-GGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAAC 89469 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || || || || |||||||||||||| Sbjct 89468 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTAACAAAGATCTGCAT 89421 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| |||||||| || || | ||||||| | || || | ||| || || |||||| Sbjct 89839 TCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAA 89780 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| | |||||||||| | || | |||||||||||| |||||| | | |||| Sbjct 89779 ATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTT-AGCCTTGACATT 89721 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | || || | ||| || || | || || ||||| || || | ||| || || Sbjct 89720 CTCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAAC 89661 Query 33738 AAAGATCTGCAT 33749 ||| || ||||| Sbjct 89660 AAAAATTTGCAT 89649 >seq335 Length=1594555 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| | ||| | || | ||| ||||| |||||||| || |||||||| || Sbjct 905813 CCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATCTGAT 905754 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | | || |||| ||| ||||| || ||||||| |||||| |||||| | || Sbjct 905753 AGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGGG 905694 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||||||| ||||| | || ||||| || | ||| || || ||| || Sbjct 905693 ATACCTTCTTTGTCTTGGATTTT-GGCTTTAACATTTTCAATGGTATCTGATGCTTCAAC 905635 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| |||||||| || | || |||||||| || ||||| Sbjct 905634 CTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTGCAT 905587 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | ||| | ||||| || ||||| ||| || || || ||||| || || Sbjct 905129 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 905070 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| | || || |||||||| || ||||| || | ||||||||||||| | || Sbjct 905069 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 905010 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||||| | || |||| || | |||||| | ||||| Sbjct 905009 ATTCCCTCTTTGTCCTGGATTTT-AGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCAC 904951 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || ||||| |||||||||||||| Sbjct 904950 TTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCAT 904903 Score = 105 bits (116), Expect = 4e-18 Identities = 171/241 (71%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||| | ||| | || | ||| ||||| ||| || || ||| Sbjct 906285 AAAATCTGCATTCCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATG 906226 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || || ||||| || |||| || |||||||| || ||||| || | ||||||| Sbjct 906225 TTGTAGTCAGAAAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGC 906166 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||||||||||| |||||| | || ||||| || | |||||| Sbjct 906165 TGGTCTGGAGGAATTCCTTCTTTGTCCTGAATTTT-GGCTTTAACATTTTCAATGGTGTC 906107 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTT-ACAAAGATCTGCA 33748 | | || || || | || || || ||||| || | |||||| || || || |||| Sbjct 906106 GGAGGCCTCTACTTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCA 906047 Query 33749 T 33749 | Sbjct 906046 T 906046 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || ||||||||||| || || || | | |||| || | || || || |||||| Sbjct 905549 TCTTTCTGAATGTTGTAATCAGAAAGAGTTCTTCCGTCTTCAAGCTGCTTGCCAGCAAAA 905490 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| ||||||||| ||| | || | ||| |||||||| ||||| | | |||| Sbjct 905489 ATCAGACGCTGCTGGTCTGGAGGGATACCCTCTTTGTCCTGGATTTT-GGCCTTGACATT 905431 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | || || | ||| || || | ||||| || || || || || || || || Sbjct 905430 TTCAATTGTATCTGAAGCTTCGACCTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGAC 905371 Query 33738 AAAGATCTGCAT 33749 |||||| ||||| Sbjct 905370 AAAGATTTGCAT 905359 >seq796 Length=23603 Score = 100 bits (110), Expect = 2e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 |||| ||||||||||||||||| | ||| || | || || || ||||| || ||||||| Sbjct 4665 CTTTCTGTATGTTGTAATCGGACAATGTTCGACCATCCTCTAACTGTTTGCCAGCAAAAA 4724 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||| ||||| |||||| | || | |||||| || || ||||| | || ||||| Sbjct 4725 TCAATCGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTT-AGCTTTAACATTT 4783 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | || || | ||| || || | || || || || ||||| || ||||| ||| Sbjct 4784 TCTATAGTATCTGAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGACA 4843 Query 33739 AAGATCTGCATAGT 33752 || || ||||| || Sbjct 4844 AAAATTTGCATTGT 4857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328679570924160