Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq335 129 6e-25 seq158 102 8e-17 >seq335 Length=1594555 Score = 129 bits (142), Expect = 6e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||| ||| | | ||||||||||||||||||||||| | ||| | | Sbjct 906717 CGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAAAGGGTCCTTCCA 906658 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||||||||||| | |||| |||||||| || ||||| || |||||||| ||| Sbjct 906657 TCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTA 906598 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| || | | ||| | ||| |||| | || ||||| | || | Sbjct 906597 TCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAACTTCTAAGGTGATG 906538 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 |||||||| || | ||||| | ||||||||||||| || Sbjct 906537 GTTTTACCGGTTAAGGTTTTGACGAAAATCTGCATGCCT 906499 Score = 122 bits (134), Expect = 8e-23 Identities = 146/197 (74%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || |||||||||||||| | |||||| ||||| | |||||||| | Sbjct 906242 TTGACTCCTTCTGAATGTTGTAGTCAGAAAGTGTACGCCCGTCTTCTAATTGTTTACCAG 906183 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||| |||||||| || |||||||| || |||||||| || |||||| ||| | Sbjct 906182 CAAAGATAAGACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGAATTTTGGCTTTAA 906123 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | || |||| | ||| ||||| | || | || |||||||||||||||| Sbjct 906122 CATTTTCAATGGTGTCGGAGGCCTCTACTTCCAGAGTAATGGTCTTACCAGTCAGAGTTT 906063 Query 132108 TT-ATGAAAATCTGCAT 132123 || | |||||| ||||| Sbjct 906062 TTGACGAAAATTTGCAT 906046 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||||||||||||||||||||| | ||| | ||| || ||||||||||||| | Sbjct 906468 GACTCTTTTTGAATGTTGTAGTCTGAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCA 906409 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| ||||| |||||| || | Sbjct 906408 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGAATTTTAGCCTTGACG 906349 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||| |||| | || ||||| | || | ||||||||||| | ||||| Sbjct 906348 TTTTCGATAGTGTCGGAAGCTTCGACTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTG 906289 Query 132110 ATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 906288 ACAAAAATCTGCAT 906275 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | ||||||| || ||||| |||||||| | ||||| | Sbjct 905117 CGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGTCCA 905058 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||| | | |||| |||||||| ||||||||||| || || ||||| Sbjct 905057 TCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATTCCCTCTTTG 904998 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| ||| | | ||| | || || | | ||||||||| | || | Sbjct 904997 TCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCACTTCCAGAGTGATG 904938 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||||| ||||| | || |||||||| Sbjct 904937 GTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCAT 904903 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGA-ATGTTGTAGTCGCTCATGGTAC--GCGAATCTTCGAGCTGTTTAC 131984 |||| |||||||| |||||||| || || ||| || | |||| || ||||||| Sbjct 906013 TTGATTCTTTTTGGGATGTTGTAATCAGACAGGGTTTCTGCCATCCTTCCAGTTGTTTAC 905954 Query 131985 CGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTT 132044 | | | | || ||||| ||||| || ||||| ||||||||||| || ||| || || Sbjct 905953 CAGCAAATATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATCTTGGCTT 905894 Query 132045 TCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAG 132104 | | | ||| | |||||| | | ||| ||||| | || | || || ||||||| || Sbjct 905893 TGACATTTTCGATAGTATCAGAAGCCTCTACTTCCAAAGTAATGGTCTTTCCAGTCAAAG 905834 Query 132105 TTTTTATGAAAATCTGCATGACT 132127 |||| | ||||| |||||| || Sbjct 905833 TTTTGACAAAAATTTGCATGCCT 905811 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||| |||||||| || ||||| || | || | |||||| || || || || | Sbjct 905782 TTGATTCTTTTTGGATATTGTAATCTGATAGTGTTCTTCCATCTTCCAGTTGCTTTCCTG 905723 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | || ||||||||||||||||| || || |||||||| || ||||| ||| | Sbjct 905722 CGAAAATCAGACGCTGTTGATCTGGTGGGATACCTTCTTTGTCTTGGATTTTGGCTTTAA 905663 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | ||||| | | || || || | || | ||||||||||||||||| | Sbjct 905662 CATTTTCAATGGTATCTGATGCTTCAACCTCCAGAGTGATGGTTTTACCAGTCAGAGTCT 905603 Query 132108 TTATGAAAATCTGCATGACT 132127 ||| ||||| |||||| || Sbjct 905602 TTACAAAAATTTGCATGCCT 905583 >seq158 Length=288468 Score = 102 bits (112), Expect = 8e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||| ||| | | | || ||||||||||| || |||||| || ||||| ||| || Sbjct 89402 AACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCGGACAGAGTACGTCCATCCTC 89343 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 |||||| || || | |||| | | ||| || ||||| || |||||||||||||| Sbjct 89342 GAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTTTATCTTG 89283 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || || | | || | ||| |||| | ||| || |||| || | || || Sbjct 89282 GATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAACCTCGAGGGTGATGGTCTT 89223 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 |||||||| ||||| | ||||||||||||| Sbjct 89222 CCCAGTCAGGGTTTTCACGAAAATCTGCATG 89192 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | |||||||| ||||||||||| ||| || ||||| ||| Sbjct 90545 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 90486 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||||| || || || | | || | | ||| || |||||||| || ||||| ||||| Sbjct 90485 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 90426 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || ||| | | ||| | ||||||| | ||| ||||| | || | || Sbjct 90425 CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 90366 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || |||| || || | ||| |||||||| Sbjct 90365 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90333 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | |||||||| ||||||||||| ||| || ||||| ||| Sbjct 91001 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 90942 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||||| || || || | | || | | ||| || |||||||| || ||||| ||||| Sbjct 90941 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 90882 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || ||| | | ||| | ||||||| | ||| ||||| | || | || Sbjct 90881 CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 90822 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || |||| || || | ||| |||||||| Sbjct 90821 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90789 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | |||||||| ||||||||||| ||| || ||||| ||| Sbjct 91457 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 91398 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||||| || || || | | || | | ||| || |||||||| || ||||| ||||| Sbjct 91397 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 91338 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || ||| | | ||| | ||||||| | ||| ||||| | || | || Sbjct 91337 CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 91278 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || |||| || || | ||| |||||||| Sbjct 91277 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 91245 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| ||||||||||| ||| || || ||| ||| ||||| || || || | | Sbjct 90298 GACTCTTTCTGAATGTTGTAATCGGACAAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCA 90239 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||||| |||||| |||||||| || || ||||| || || || || || | Sbjct 90238 AAGATTAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACG 90179 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || |||| | || ||||| | || | || |||||||||| ||| ||| Sbjct 90178 TTTTCAATTGTGTCGGAGGCTTCAACTTCAAGGGTAATGGTCTTACCAGTCAAAGTCTTT 90119 Query 132110 ATGAAAATCTGCAT 132123 | ||| || ||||| Sbjct 90118 ACGAAGATTTGCAT 90105 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||||||||||||||| || || || ||||||||| || ||||| | | Sbjct 89842 GATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCA 89783 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | ||| ||||||||||| || |||||||| || |||||| || | Sbjct 89782 AAAATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTTAGCCTTGACA 89723 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | | || ||||| | || | ||||| ||||| || || || Sbjct 89722 TTCTCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTA 89663 Query 132110 ATGAAAATCTGCATGACT 132127 | ||||| |||||| || Sbjct 89662 ACAAAAATTTGCATGCCT 89645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476574870311280