Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq422 96.9 1e-16
seq236 95.1 4e-16
>seq422
Length=246926
Score = 96.9 bits (106), Expect = 1e-16
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| |||||||||||||||||| ||||| |||||
Sbjct 145645 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTC 145704
Query 2825 AACCCCGGGCTTCAGC 2840
|| |||||| ||| ||
Sbjct 145705 AATCCCGGGTTTCGGC 145720
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| |
Sbjct 150403 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 150462
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 150463 CCGGGTTTCGGC 150474
>seq236
Length=27037145
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| |
Sbjct 46167 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 46226
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 46227 CCGGGTTTCGGC 46238
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| |
Sbjct 12130792 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 12130851
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 12130852 CCGGGTTTCGGC 12130863
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| |
Sbjct 20645281 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 20645222
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 20645221 CCGGGTTTCGGC 20645210
Score = 78.8 bits (86), Expect = 3e-11
Identities = 61/73 (84%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||| ||||||||| | ||||||||||||| ||||||| ||||| |
Sbjct 2018735 GGCCGAAATAGCTCAGCTGGGAGAGCGTCAGACTGAAGATCTGCAGGTCCCCGGTTCGAT 2018794
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 2018795 CCCGGGTTTCGGC 2018807
Score = 78.8 bits (86), Expect = 3e-11
Identities = 61/73 (84%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||| ||||||||| | ||||||||||||| ||||||| ||||| |
Sbjct 2018910 GGCCGAAATAGCTCAGCTGGGAGAGCGTCAGACTGAAGATCTGCAGGTCCCCGGTTCGAT 2018969
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 2018970 CCCGGGTTTCGGC 2018982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848542881210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |