Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq422 96.9 1e-16 seq236 95.1 4e-16 >seq422 Length=246926 Score = 96.9 bits (106), Expect = 1e-16 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct 145645 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTC 145704 Query 2825 AACCCCGGGCTTCAGC 2840 || |||||| ||| || Sbjct 145705 AATCCCGGGTTTCGGC 145720 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct 150403 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 150462 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 150463 CCGGGTTTCGGC 150474 >seq236 Length=27037145 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct 46167 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 46226 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 46227 CCGGGTTTCGGC 46238 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct 12130792 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 12130851 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 12130852 CCGGGTTTCGGC 12130863 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct 20645281 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 20645222 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 20645221 CCGGGTTTCGGC 20645210 Score = 78.8 bits (86), Expect = 3e-11 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||| ||||||||| | ||||||||||||| ||||||| ||||| | Sbjct 2018735 GGCCGAAATAGCTCAGCTGGGAGAGCGTCAGACTGAAGATCTGCAGGTCCCCGGTTCGAT 2018794 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 2018795 CCCGGGTTTCGGC 2018807 Score = 78.8 bits (86), Expect = 3e-11 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||| ||||||||| | ||||||||||||| ||||||| ||||| | Sbjct 2018910 GGCCGAAATAGCTCAGCTGGGAGAGCGTCAGACTGAAGATCTGCAGGTCCCCGGTTCGAT 2018969 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 2018970 CCCGGGTTTCGGC 2018982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848542881210