Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq236 120 4e-22
>seq236
Length=27037145
Score = 120 bits (132), Expect = 4e-22
Identities = 171/239 (72%), Gaps = 10/239 (4%)
Strand=Plus/Plus
Query 147270 GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329
||| |||||| |||| ||||||||||||||||| |||||||| || || || || |||||
Sbjct 25468362 GTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCC 25468421
Query 147330 GGGCTTTCTGTGCGA----GAAGCCCGCCCGCTT-GAGAAACTCGGGGGACCCGTGGGCG 147384
||| |||| ||| |||| | | ||| || || |||| ||| ||||
Sbjct 25468422 -----TTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCG 25468476
Query 147385 TCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAAC 147444
|||||||| ||| || ||||| || |||||||| | || || ||||| |||||||||
Sbjct 25468477 TCCCAGATTTTCACGCCTTTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAAC 25468536
Query 147445 CAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503
|||| || ||| || || | | ||| || || | ||| || || ||||| || ||
Sbjct 25468537 CAGAACAACTCTTCTGCCACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595
Score = 109 bits (120), Expect = 6e-19
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050
|| ||| || || | |||| |||||||||||||||| ||| |||||||| || || ||
Sbjct 25468009 GGCCACATGAGCGATCATGATGGTGAGCAGCGAGTAGGAGGCGATGTTGAATGGCACACC 25468068
Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110
|||||||| || || | || || || || || || |||||||| |||||| |||||
Sbjct 25468069 AAGGCCCATATCGCCGGCTCTTTGATAAAGATGACAGGAGAGCTCGCCGTCGTAGACGTA 25468128
Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170
||||| || |||||| ||||| || ||||| || | |||| | ||||||||
Sbjct 25468129 GAACTGAGCGAGCGAGTGGCAGGGCGGGAGGGCCATTTTCGGAATGTCCACAGGGTTCCA 25468188
Query 147171 GGC 147173
||
Sbjct 25468189 CGC 25468191
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/224 (70%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 147281 TGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGT 147340
|||| || || ||||||||||||||||| || || || |||| |||||| | ||| |
Sbjct 26890852 TGGCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTAT 26890793
Query 147341 GCGAGAAGCCCGCCCGCTTG-AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399
| ||| ||||| | | | ||| || | || | | ||||| |||||| ||
Sbjct 26890792 CGGTGAA-CCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACG 26890734
Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCC 147459
|| ||| ||| ||||| || | || ||||| ||| ||||||||||||| ||||||
Sbjct 26890733 CCTTTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCG 26890674
Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503
| || | | ||||| || ||||||| |||||||| || ||
Sbjct 26890673 ACCACAGCACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583443523627200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |