Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq236 120 4e-22 >seq236 Length=27037145 Score = 120 bits (132), Expect = 4e-22 Identities = 171/239 (72%), Gaps = 10/239 (4%) Strand=Plus/Plus Query 147270 GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 ||| |||||| |||| ||||||||||||||||| |||||||| || || || || ||||| Sbjct 25468362 GTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCC 25468421 Query 147330 GGGCTTTCTGTGCGA----GAAGCCCGCCCGCTT-GAGAAACTCGGGGGACCCGTGGGCG 147384 ||| |||| ||| |||| | | ||| || || |||| ||| |||| Sbjct 25468422 -----TTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCG 25468476 Query 147385 TCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAAC 147444 |||||||| ||| || ||||| || |||||||| | || || ||||| ||||||||| Sbjct 25468477 TCCCAGATTTTCACGCCTTTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAAC 25468536 Query 147445 CAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 |||| || ||| || || | | ||| || || | ||| || || ||||| || || Sbjct 25468537 CAGAACAACTCTTCTGCCACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595 Score = 109 bits (120), Expect = 6e-19 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || ||| || || | |||| |||||||||||||||| ||| |||||||| || || || Sbjct 25468009 GGCCACATGAGCGATCATGATGGTGAGCAGCGAGTAGGAGGCGATGTTGAATGGCACACC 25468068 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110 |||||||| || || | || || || || || || |||||||| |||||| ||||| Sbjct 25468069 AAGGCCCATATCGCCGGCTCTTTGATAAAGATGACAGGAGAGCTCGCCGTCGTAGACGTA 25468128 Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 ||||| || |||||| ||||| || ||||| || | |||| | |||||||| Sbjct 25468129 GAACTGAGCGAGCGAGTGGCAGGGCGGGAGGGCCATTTTCGGAATGTCCACAGGGTTCCA 25468188 Query 147171 GGC 147173 || Sbjct 25468189 CGC 25468191 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/224 (70%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 147281 TGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGT 147340 |||| || || ||||||||||||||||| || || || |||| |||||| | ||| | Sbjct 26890852 TGGCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTAT 26890793 Query 147341 GCGAGAAGCCCGCCCGCTTG-AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | ||| ||||| | | | ||| || | || | | ||||| |||||| || Sbjct 26890792 CGGTGAA-CCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACG 26890734 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCC 147459 || ||| ||| ||||| || | || ||||| ||| ||||||||||||| |||||| Sbjct 26890733 CCTTTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCG 26890674 Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 | || | | ||||| || ||||||| |||||||| || || Sbjct 26890673 ACCACAGCACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583443523627200