Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq335 105 5e-18 seq158 82.4 6e-11 >seq335 Length=1594555 Score = 105 bits (116), Expect = 5e-18 Identities = 150/207 (72%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| ||||| |||||||| ||||||||||| ||||| ||| | Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || | | | || ||| || ||| |||||||||||| | || ||| ||| Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAA-GAT-TCTAAAACTATGGGCGATTACA 106437 ||| | || || | ||| || |||||| | ||| ||| | |||| || ||||||| Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994 Query 106438 ACAT-ACAAAAAGAATCTACACTACAT 106463 |||| ||||||||||| ||||| ||| Sbjct 905995 ACATCCCAAAAAGAATCAACACTCCAT 906021 >seq158 Length=288468 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || | |||||||| || ||||| ||||| ||| | Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || |||||| ||||||||||| | || ||||| Sbjct 89709 GATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 89768 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| || || ||| | |||||| || || || |||||| Sbjct 89769 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAAC 89828 Query 106440 ATACAAAAAGAATCTACACTACA 106462 || ||||| ||||| ||||| || Sbjct 89829 ATTCAAAAGGAATCCACACTTCA 89851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402299699115584