Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq335 105 5e-18
seq158 82.4 6e-11
>seq335
Length=1594555
Score = 105 bits (116), Expect = 5e-18
Identities = 150/207 (72%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||||||||| ||||| |||||||| ||||||||||| ||||| ||| |
Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| || | | | || ||| || ||| |||||||||||| | || ||| |||
Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAA-GAT-TCTAAAACTATGGGCGATTACA 106437
||| | || || | ||| || |||||| | ||| ||| | |||| || |||||||
Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994
Query 106438 ACAT-ACAAAAAGAATCTACACTACAT 106463
|||| ||||||||||| ||||| |||
Sbjct 905995 ACATCCCAAAAAGAATCAACACTCCAT 906021
>seq158
Length=288468
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||||||||||||||| || | |||||||| || ||||| ||||| ||| |
Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| | ||| | || || |||||| ||||||||||| | || |||||
Sbjct 89709 GATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 89768
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| ||||| |||| ||| || || ||| | |||||| || || || ||||||
Sbjct 89769 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAAC 89828
Query 106440 ATACAAAAAGAATCTACACTACA 106462
|| ||||| ||||| ||||| ||
Sbjct 89829 ATTCAAAAGGAATCCACACTTCA 89851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402299699115584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |