Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 230 3e-55
seq14 114 2e-20
seq410 84.2 3e-11
>seq1
Length=33571687
Score = 230 bits (254), Expect = 3e-55
Identities = 326/456 (71%), Gaps = 2/456 (0%)
Strand=Plus/Plus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
|| ||||| ||||||||||||||| |||||||||||||||| ||||||||| || |
Sbjct 24628368 TCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 24628427
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635
||| || || ||||| ||||| || | || || ||||| | ||| ||| ||
Sbjct 24628428 CACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 24628486
Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695
|| ||||| | ||| |||||||| || ||||| || ||||| ||||||||||| || |
Sbjct 24628487 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 24628546
Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755
|| |||| |||||| ||||| | ||| || || | |||| |||| || ||||| ||
Sbjct 24628547 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 24628606
Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815
||||| | ||| | ||||||||||| || ||||| | ||| |||| | |||||||||
Sbjct 24628607 TTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 24628666
Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACC 69875
| ||| ||||| |||||||| | | || | || | ||| | || | | |||
Sbjct 24628667 TACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACC 24628726
Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935
|| || || || ||| || || |||||| | |||| ||| ||||| || || ||
Sbjct 24628727 AATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 24628786
Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971
|| || || || |||| ||||||| ||||| ||
Sbjct 24628787 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822
Score = 105 bits (116), Expect = 9e-18
Identities = 220/327 (67%), Gaps = 8/327 (2%)
Strand=Plus/Plus
Query 69115 ATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTA 69174
||||| || || || || ||| | || || ||||| |||||||| || || || |||||
Sbjct 24627886 ATACCAATGGGCCTGTGCCTCGTGTTGGACCTTTCTGCTTCTGGGATGGGGTAGTAATTT 24627945
Query 69175 ATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGA 69234
| || |||||||||| | ||||| | ||||| | || ||||| ||||| |
Sbjct 24627946 AGGTCAATAATTTTATCCAAATTTCTTGTTGTGACTTTTGCGACTTCCTTAAGTTTTGCA 24628005
Query 69235 AAATCAAATCGTCCATCTA-------TAACAAACATATTCAGTGCTACAGATGCTAGATT 69287
||||| | ||| | || | ||||||||||| | || | |||||||| |||
Sbjct 24628006 AAATCGTA-CGTTTTTTTACTGGTATTTACAAACATATTAACGGCAATAGATGCTAAATT 24628064
Query 69288 ACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACA 69347
|| || ||||| || | | | | ||| || | | || || |||| |||||| |
Sbjct 24628065 GCACACGGCTACTTCGTCTGGAGAAGAATACTGCACAACTTCCGTGCATAAATTACTGCT 24628124
Query 69348 TTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAAT 69407
| ||||||| || || ||||| ||||| || |||||| || ||||| | ||
Sbjct 24628125 TCTGATAGTACCAAGGTTTTGTTGATTGGATTTGCGATTACAGTGATCTTTGTATAACAT 24628184
Query 69408 AAACGGAGTACCAGTTTCAATCTGAGA 69434
| || || |||||||||| |||||
Sbjct 24628185 GTAAGGGGTTCCAGTTTCAACTTGAGA 24628211
>seq14
Length=421909
Score = 114 bits (126), Expect = 2e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712
|| || || ||||||| ||| | ||||||| |||||| | | | | ||| ||||||
Sbjct 277594 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277535
Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772
|| || ||||| || || || || | | ||||||||||||||| || || || |||
Sbjct 277534 ACAATAATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277475
Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGC 68825
|| |||||||| ||||||| || ||||| || || || |||||||| |||||
Sbjct 277474 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTTGGCATTGGTGC 277422
Score = 109 bits (120), Expect = 8e-19
Identities = 199/290 (69%), Gaps = 1/290 (0%)
Strand=Plus/Minus
Query 69967 CAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAA-TGTAGGAGATGCGTGAGT 70025
|| || |||||||| || |||||||| | ||| ||| || |||||||||||| || ||
Sbjct 275836 CACCTGGACATTTGTTGGTGTATAGTACATGCAAAAAAAAAGTGTAGGAGATGCATGTGT 275777
Query 70026 GAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATG 70085
||| | ||||||| ||| ||||| || || || ||| | |||| | |||
Sbjct 275776 GAAGTAACGTTCAGAAGTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTATG 275717
Query 70086 AATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTAT 70145
|| ||| || || | ||| | ||||| || ||||| || ||| || ||| ||
Sbjct 275716 AAGAGCTACTGCAACTCTCATAAGCATATCTTGTGGTCGCTCAACCACTTGTCCATTAAT 275657
Query 70146 TTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCT 70205
| || | ||| ||| |||| |||||||| ||||||||||| | ||| |||||
Sbjct 275656 CCTGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCTCT 275597
Query 70206 TTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATAT 70255
|| || || ||||||||||| |||| |||| ||| || |||||
Sbjct 275596 GTCATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTTTTGAATTATAT 275547
Score = 107 bits (118), Expect = 3e-18
Identities = 186/271 (69%), Gaps = 6/271 (2%)
Strand=Plus/Minus
Query 69163 GGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCC 69222
||||||| ||| | ||| |||||||||| | ||| | || |||||| || ||
Sbjct 276917 GGATAATGATTCAGATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCT 276858
Query 69223 TTTAGTTTGAGAAAATCAAA------TCGTCCATCTATAACAAACATATTCAGTGCTACA 69276
|| | ||| ||||||| | | | || | |||||||||||| | || |
Sbjct 276857 TTCAATTTTAGAAAATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATG 276798
Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336
||||||| |||||| |||||||| || || | | | |||||||| || || || |||
Sbjct 276797 GATGCTAAATTACACACTGCTACTTCGTTTGGAGAAGAGTATTGTATAATTTCAGTGCAT 276738
Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396
| |||||| | ||| ||||| || |||||||| ||||| || || ||| ||
Sbjct 276737 AAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTTGATTTACGATTGCAGTGATCT 276678
Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAA 69427
|| || || ||| | ||||| ||||||||||
Sbjct 276677 TTATAGAGCATATAAGGAGTTCCAGTTTCAA 276647
Score = 89.7 bits (98), Expect = 7e-13
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 68946 TGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAA 69005
||| ||||| || | ||| ||||| | | || || | ||||||||| || |||||
Sbjct 277213 TGAACCATTGTAGGAAGAATATGGTCCATTTTCTTTGGCCAATTCACAACTAGCTTCTAA 277154
Query 69006 TGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATC 69065
|| || |||| | |||||||||||| | |||| || | || || ||| ||| ||
Sbjct 277153 AGCTCCAAAATATAATGTTTCGAAAATTTGAATATTTAGCTGCTGAGCCTCTTTACTCTC 277094
Query 69066 GAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119
||||||||| | | | | ||| || ||||||||||| || ||||| |||||
Sbjct 277093 GAATGGATAGCGCATTAACAAAAAAGCGTCTGCCAATCCTTGTACCCCGATACC 277040
Score = 86.0 bits (94), Expect = 9e-12
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579
||||||||||||||||||||| || || |||||||| | ||||||||| || |||
Sbjct 276453 AATTCATCTCCCCAAACATCAGGTAAGCCTGGACATTCGTGTGGACACATTAAACTCCAT 276394
Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639
|||| || |||| || |||||||| ||| || ||||| | || ||| ||
Sbjct 276393 TTCTCATTGTCAAGTACTCTTTGCATAAATAAATCTGGGATCCATAAGGCATAAAACAGT 276334
Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCT 69666
|| || | ||||| |||||| || |||
Sbjct 276333 TCCCTTGCTCTATATTCTTCCTTACCT 276307
>seq410
Length=4553683
Score = 84.2 bits (92), Expect = 3e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 40112 TCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCA 40171
||||||||||| ||||||||||||| || || || ||||||||||||| ||| || ||
Sbjct 2615640 TCTACTTCTTCTACTGTCCAAAACGAAGCTTCGGCTTTTTTGTACATGTGCCAAATGTCG 2615581
Query 40172 CGATATTGTATTGGAAAAATAACAAATCT 40200
| |||| |||||||| | ||||||||
Sbjct 2615580 GGCCATTGGATTGGAAACAATACAAATCT 2615552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686856440376720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |