Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_027398.1
Length=38742
Score E
Sequences producing significant alignments: (Bits) Value
seq5383 253 5e-63
>seq5383
Length=901
Score = 253 bits (280), Expect = 5e-63
Identities = 576/859 (67%), Gaps = 22/859 (3%)
Strand=Plus/Minus
Query 30267 CCGTACAAACGCGATGGTGAGTTGTTGCAGGTCAAGCGAATCAGCACTGAGCGCCCGGAC 30326
|||||||| || || || || || |||||||| |||||||||||||||||||| || |
Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801
Query 30327 GGGAAGAAAGTCATTATGGCAGAAGGTGATTGCGAACCTTGTCTGTTCGGATGGCAGGCT 30386
|| || || ||||||||||| |||| | || |||||||| || || || ||||||||
Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741
Query 30387 CTGG---ACGCTGGCGTGAGGGCGGTTG-TACTTTGCGAAGGCGAAATTGATTGTATGAG 30442
|| || || | ||| ||| | || || |||||||||||||| || |||||
Sbjct 740 ATGCCAAACAATG-CAAGAGTC---TTGATCCTGTGTGAAGGCGAAATTGACTGCATGAG 685
Query 30443 CTATGCGCAATACGGCATCTCGGCGTTATCCGTGCCGTTTGGTGGCGGGAAAGGCGCTAA 30502
||| || ||||| | | || ||||| || ||||||||||| || || || || ||
Sbjct 684 TTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGCAAA 625
Query 30503 GCAACAGTGGATTGAGTTTGAGTATCACAACCTCGACAGGTTTGAGGAAATATTCATCTC 30562
||| || ||||||||||| || || |||||||| || | || ||||| | | ||
Sbjct 624 GCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTTATC 565
Query 30563 GATGGACGTTGATGATGTTGGTCGTGAAGCCGCAAGGGAAATCGCAAGCCGACTCGGTGA 30622
| || ||||| ||||| | || |||| ||||| || || | || || ||
Sbjct 564 ACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGGAGA 505
Query 30623 ACATCGTTGCCGTCTTGTTACTCTGCCGTACAAAGACATCAACGAATGCCTGATGAACGG 30682
||| ||||| || | | | | ||| | ||||| |||||||||||| | | ||
Sbjct 504 ACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGCTGG 445
Query 30683 TGTTACCGAGGATGAAATCTGGCAGTACATCGGCACGGCATCCTACTTTGATCCTGAAGA 30742
| || || ||||| | | | | ||| | || ||| | |||||||| ||||| ||
Sbjct 444 AATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGAGGA 385
Query 30743 ACTCTACAGCGCGCGAGAGTTTTACCAGGACACTATCAACGCTTTCTACGGCAAGCAGCA 30802
||| || ||||| || || ||||| ||||| | | | || || || ||||| | ||
Sbjct 384 ACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGAACA 325
Query 30803 GTATCTGTTTAATCCACCGTGGGAATCTCTGGCAGATAAATTCCAGTTTCGTGAGGCCGA 30862
|| || || | | |||||||| | || | || || ||| | ||| | ||
Sbjct 324 ATACCTATTCAGAACGCCGTGGGAGCCACTTAATTACAACTTTAGCTTTAGAGAGTCAGA 265
Query 30863 GTTGACGCTGGTCAATGGTGTGAACGGTCACGGAAAAACGGAGGTTGTCGGGCATATGGC 30922
|| || | | || ||||| || || ||||| ||||| || ||||| ||||||||
Sbjct 264 ATTAACCGTTCTGAACGGTGTTAATGGACACGGCAAAACAGAAGTTGTGGGGCATATTAT 205
Query 30923 ACTTGAGGCAATGCGTCAGGGTGTGAAGACG----TGCATCGCGTCACTTGAGCTGAAGC 30978
||||| |||||||| || || || ||| | || || | ||||| ||||
Sbjct 204 GCTTGAAGCAATGCGCCA----ACAAACCCGCGTTTGCGTGGCATCTTTGGAGCTCAAGC 149
Query 30979 CTGGTATTCTCCTTAAGCGCCTTACCCGTCAGGCGACGTGCTGCAAGATGCCGCCAGTGC 31038
| || || | || || || | | || | || |||| | | ||| ||| |
Sbjct 148 CGGGGCAGCTATTAAAACGACTAATAAGACAAACAACCTGCTCTGAAAAGCCACCAATAA 89
Query 31039 TGGAAATTGACTCTGCAT--TTAAAT-TTTATGACGAAAGACTTTGGGTGTTTGGCCTGA 31095
||||||| || ||||| || | | ||||||| || | || ||| | ||||||||||
Sbjct 88 TGGAAATAGA---TGCATCGTTCAGTGTTTATGATGATCGCCTATGGTTATTTGGCCTGA 32
Query 31096 CTGGAACGGCGAAAGCCGA 31114
| ||||| || || || ||
Sbjct 31 CAGGAACAGCCAAGGCAGA 13
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123843831354304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |