Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq5383 253 5e-63 >seq5383 Length=901 Score = 253 bits (280), Expect = 5e-63 Identities = 576/859 (67%), Gaps = 22/859 (3%) Strand=Plus/Minus Query 30267 CCGTACAAACGCGATGGTGAGTTGTTGCAGGTCAAGCGAATCAGCACTGAGCGCCCGGAC 30326 |||||||| || || || || || |||||||| |||||||||||||||||||| || | Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801 Query 30327 GGGAAGAAAGTCATTATGGCAGAAGGTGATTGCGAACCTTGTCTGTTCGGATGGCAGGCT 30386 || || || ||||||||||| |||| | || |||||||| || || || |||||||| Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741 Query 30387 CTGG---ACGCTGGCGTGAGGGCGGTTG-TACTTTGCGAAGGCGAAATTGATTGTATGAG 30442 || || || | ||| ||| | || || |||||||||||||| || ||||| Sbjct 740 ATGCCAAACAATG-CAAGAGTC---TTGATCCTGTGTGAAGGCGAAATTGACTGCATGAG 685 Query 30443 CTATGCGCAATACGGCATCTCGGCGTTATCCGTGCCGTTTGGTGGCGGGAAAGGCGCTAA 30502 ||| || ||||| | | || ||||| || ||||||||||| || || || || || Sbjct 684 TTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGCAAA 625 Query 30503 GCAACAGTGGATTGAGTTTGAGTATCACAACCTCGACAGGTTTGAGGAAATATTCATCTC 30562 ||| || ||||||||||| || || |||||||| || | || ||||| | | || Sbjct 624 GCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTTATC 565 Query 30563 GATGGACGTTGATGATGTTGGTCGTGAAGCCGCAAGGGAAATCGCAAGCCGACTCGGTGA 30622 | || ||||| ||||| | || |||| ||||| || || | || || || Sbjct 564 ACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGGAGA 505 Query 30623 ACATCGTTGCCGTCTTGTTACTCTGCCGTACAAAGACATCAACGAATGCCTGATGAACGG 30682 ||| ||||| || | | | | ||| | ||||| |||||||||||| | | || Sbjct 504 ACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGCTGG 445 Query 30683 TGTTACCGAGGATGAAATCTGGCAGTACATCGGCACGGCATCCTACTTTGATCCTGAAGA 30742 | || || ||||| | | | | ||| | || ||| | |||||||| ||||| || Sbjct 444 AATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGAGGA 385 Query 30743 ACTCTACAGCGCGCGAGAGTTTTACCAGGACACTATCAACGCTTTCTACGGCAAGCAGCA 30802 ||| || ||||| || || ||||| ||||| | | | || || || ||||| | || Sbjct 384 ACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGAACA 325 Query 30803 GTATCTGTTTAATCCACCGTGGGAATCTCTGGCAGATAAATTCCAGTTTCGTGAGGCCGA 30862 || || || | | |||||||| | || | || || ||| | ||| | || Sbjct 324 ATACCTATTCAGAACGCCGTGGGAGCCACTTAATTACAACTTTAGCTTTAGAGAGTCAGA 265 Query 30863 GTTGACGCTGGTCAATGGTGTGAACGGTCACGGAAAAACGGAGGTTGTCGGGCATATGGC 30922 || || | | || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct 264 ATTAACCGTTCTGAACGGTGTTAATGGACACGGCAAAACAGAAGTTGTGGGGCATATTAT 205 Query 30923 ACTTGAGGCAATGCGTCAGGGTGTGAAGACG----TGCATCGCGTCACTTGAGCTGAAGC 30978 ||||| |||||||| || || || ||| | || || | ||||| |||| Sbjct 204 GCTTGAAGCAATGCGCCA----ACAAACCCGCGTTTGCGTGGCATCTTTGGAGCTCAAGC 149 Query 30979 CTGGTATTCTCCTTAAGCGCCTTACCCGTCAGGCGACGTGCTGCAAGATGCCGCCAGTGC 31038 | || || | || || || | | || | || |||| | | ||| ||| | Sbjct 148 CGGGGCAGCTATTAAAACGACTAATAAGACAAACAACCTGCTCTGAAAAGCCACCAATAA 89 Query 31039 TGGAAATTGACTCTGCAT--TTAAAT-TTTATGACGAAAGACTTTGGGTGTTTGGCCTGA 31095 ||||||| || ||||| || | | ||||||| || | || ||| | |||||||||| Sbjct 88 TGGAAATAGA---TGCATCGTTCAGTGTTTATGATGATCGCCTATGGTTATTTGGCCTGA 32 Query 31096 CTGGAACGGCGAAAGCCGA 31114 | ||||| || || || || Sbjct 31 CAGGAACAGCCAAGGCAGA 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123843831354304