Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 4e-32
seq236 95.1 1e-14
seq410 84.2 2e-11
>seq1
Length=33571687
Score = 152 bits (168), Expect = 4e-32
Identities = 208/289 (72%), Gaps = 6/289 (2%)
Strand=Plus/Plus
Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301
|||||| || ||| |||||| || || || || | |||||||||| || || ||
Sbjct 14822128 AATTGGTGGTTTGGATAAAGAATTCAGTGCTATTTTCAGAAGAGCATTTGCATCACGGGT 14822187
Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTA 19361
||| || |||| || ||| |||||| ||||||||||| ||| || | ||||||||
Sbjct 14822188 ATTTCCTCCAGAAGTAGTTATACAATTAGGATGTAAACACGTTAAAGGTATCTTGCTTTA 14822247
Query 19362 TGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAA---ATTACTTAC 19418
||||||||| ||| || ||||| | || || || || || |||| || | |
Sbjct 14822248 TGGGCCACCTGGTACAGGTAAAACGCTTATGGCTAGGCAAATTGGTAACATGTTGAATGC 14822307
Query 19419 AAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATC 19478
|| | || ||||||||||| ||||| || |||||||| |||||||||| ||| |
Sbjct 14822308 AAGAGAA---CCCAAAATTGTCAATGGCCCACAAATCTTAGATAAATATGTTGGTGAGAG 14822364
Query 19479 GGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAA 19527
|||| ||| | ||| | |||||||||| ||||||||||| |||||
Sbjct 14822365 TGAAGCCAATATCCGAAGACTGTTTGCTGATGCTGAAGAAGAGGAAAAA 14822413
>seq236
Length=27037145
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 40995 CCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCA 41054
|| ||| |||||| |||||| ||||||| ||||| ||| || | | | | |||||
Sbjct 26891005 CCGGATGACCGACGAATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTATAATGGCT 26891064
Query 41055 TTGCCACCTTGTCATT-TGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCA 41113
| || ||||||||| | | || || |||| || |||| || | || |||||
Sbjct 26891065 CTTCCTCCTTGTCATGCTCTGGTG-CAATTTTGTGTAGCTGATGGAGAGTTATCTTGTCA 26891123
Query 41114 ATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGC 41173
||||||||||| | ||| |||||||| || ||||| || ||||| || |||| |
Sbjct 26891124 GCTGTATCAAAGAAGTGCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTTATTC 26891183
Query 41174 TCTGCTCACGTATATGATTGCACACGTTACCAATTTAAA 41212
| ||||||| | |||||||| || | || ||||| ||
Sbjct 26891184 TTTGCTCACATGCATGATTGCCCATATAACGAATTTGAA 26891222
>seq410
Length=4553683
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| |||||||||| |||| | ||||| ||||| |||||||||||||| |
Sbjct 2615552 AGATTTGTATTGTTTCCAATCCAATGGCCCGACATTTGGCACATGTACAAAAAAGCCGAA 2615611
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGA 43785
|| || |||||||||| ||||||||| ||
Sbjct 2615612 GCTTCGTTTTGGACAGTAGAAGAAGTAGA 2615640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397426461318490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |