Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 152 4e-32 seq236 95.1 1e-14 seq410 84.2 2e-11 >seq1 Length=33571687 Score = 152 bits (168), Expect = 4e-32 Identities = 208/289 (72%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 |||||| || ||| |||||| || || || || | |||||||||| || || || Sbjct 14822128 AATTGGTGGTTTGGATAAAGAATTCAGTGCTATTTTCAGAAGAGCATTTGCATCACGGGT 14822187 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTA 19361 ||| || |||| || ||| |||||| ||||||||||| ||| || | |||||||| Sbjct 14822188 ATTTCCTCCAGAAGTAGTTATACAATTAGGATGTAAACACGTTAAAGGTATCTTGCTTTA 14822247 Query 19362 TGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAA---ATTACTTAC 19418 ||||||||| ||| || ||||| | || || || || || |||| || | | Sbjct 14822248 TGGGCCACCTGGTACAGGTAAAACGCTTATGGCTAGGCAAATTGGTAACATGTTGAATGC 14822307 Query 19419 AAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATC 19478 || | || ||||||||||| ||||| || |||||||| |||||||||| ||| | Sbjct 14822308 AAGAGAA---CCCAAAATTGTCAATGGCCCACAAATCTTAGATAAATATGTTGGTGAGAG 14822364 Query 19479 GGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAA 19527 |||| ||| | ||| | |||||||||| ||||||||||| ||||| Sbjct 14822365 TGAAGCCAATATCCGAAGACTGTTTGCTGATGCTGAAGAAGAGGAAAAA 14822413 >seq236 Length=27037145 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 40995 CCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCA 41054 || ||| |||||| |||||| ||||||| ||||| ||| || | | | | ||||| Sbjct 26891005 CCGGATGACCGACGAATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTATAATGGCT 26891064 Query 41055 TTGCCACCTTGTCATT-TGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCA 41113 | || ||||||||| | | || || |||| || |||| || | || ||||| Sbjct 26891065 CTTCCTCCTTGTCATGCTCTGGTG-CAATTTTGTGTAGCTGATGGAGAGTTATCTTGTCA 26891123 Query 41114 ATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGC 41173 ||||||||||| | ||| |||||||| || ||||| || ||||| || |||| | Sbjct 26891124 GCTGTATCAAAGAAGTGCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTTATTC 26891183 Query 41174 TCTGCTCACGTATATGATTGCACACGTTACCAATTTAAA 41212 | ||||||| | |||||||| || | || ||||| || Sbjct 26891184 TTTGCTCACATGCATGATTGCCCATATAACGAATTTGAA 26891222 >seq410 Length=4553683 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || ||||| |||||||||| |||| | ||||| ||||| |||||||||||||| | Sbjct 2615552 AGATTTGTATTGTTTCCAATCCAATGGCCCGACATTTGGCACATGTACAAAAAAGCCGAA 2615611 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGA 43785 || || |||||||||| ||||||||| || Sbjct 2615612 GCTTCGTTTTGGACAGTAGAAGAAGTAGA 2615640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397426461318490