Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_027984.1
Length=57677
Score E
Sequences producing significant alignments: (Bits) Value
seq5383 208 3e-49
>seq5383
Length=901
Score = 208 bits (230), Expect = 3e-49
Identities = 387/564 (69%), Gaps = 8/564 (1%)
Strand=Plus/Minus
Query 13915 CCGTACAAACGCGATGGTGAGTTGTTGCAGGTCAAGCGAATCAGCACTGAGCGCCCGGAC 13974
|||||||| || || || || || |||||||| |||||||||||||||||||| || |
Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801
Query 13975 GGGAAGAAAGTCATTATGGCAGAAGGTGATTGCGAACCTTGTCTGTTCGGATGGCAGGCT 14034
|| || || ||||||||||| |||| | || |||||||| || || || ||||||||
Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741
Query 14035 CTGG---ACGCTGGCGTGAGGGCGGTTG-TACTTTGCGAAGGCGAAATTGATTGTATGAG 14090
|| || || | ||| ||| | || || |||||||||||||| || |||||
Sbjct 740 ATGCCAAACAATG-CAAGAGTC---TTGATCCTGTGTGAAGGCGAAATTGACTGCATGAG 685
Query 14091 CTATGCGCAATACGGCATCTCGGCGTTATCCGTGCCGTTTGGTGGCGGGAAAGGCGCTAA 14150
||| || ||||| | | || ||||| || ||||||||||| || || || || ||
Sbjct 684 TTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGCAAA 625
Query 14151 GCAGCAGTGGATTGAGTTTGAGTATCACAACCTCGACAGGTTTGAGGAAATATTCATCTC 14210
|||||| ||||||||||| || || |||||||| || | || ||||| | | ||
Sbjct 624 GCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTTATC 565
Query 14211 GATGGACGTTGATGATGTTGGTCGTGAAGCCGCAAGGGAAATCGCAAGCCGACTCGGTGA 14270
| || ||||| ||||| | || |||| ||||| || || | || || ||
Sbjct 564 ACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGGAGA 505
Query 14271 ACATCGTTGCCGTCTTGTTACTCTGCCGTACAAAGACATCAACGAATGCCTGATGAACGG 14330
||| ||||| || | | | | ||| | ||||| |||||||||||| | | ||
Sbjct 504 ACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGCTGG 445
Query 14331 TGTTACCGAGGATGAAATCTGGCAGTACATCGGCACGGCATCCTATTTCGATCCTGAAGA 14390
| || || ||||| | | | | ||| | || ||| | || || || ||||| ||
Sbjct 444 AATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGAGGA 385
Query 14391 ACTCTACAGTGCGCGAGAGTTTTACCAGGACACTATCAACGCTTTCTACGGCAAGAAGCA 14450
||| || || || || || ||||| ||||| | | | || || || ||||| | ||
Sbjct 384 ACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGAACA 325
Query 14451 GTATCTGTTTAATCCACCGTGGGA 14474
|| || || | | ||||||||
Sbjct 324 ATACCTATTCAGAACGCCGTGGGA 301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 184431443660364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |