Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq236 138 9e-28 >seq236 Length=27037145 Score = 138 bits (152), Expect = 9e-28 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 ||||||||||||||||||||||| || || || || |||| ||| |||||||| || | Sbjct 26890850 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 26890791 Query 30299 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30358 ||| || | |||||||| || | |||| ||||||| |||||| ||||| || Sbjct 26890790 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 26890731 Query 30359 TTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30418 || || | |||||||| | ||| ||||| || | | |||||| |||| |||||| || Sbjct 26890730 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 26890671 Query 30419 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 || || ||||| || ||||||| || || || ||||| Sbjct 26890670 ACAGCACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630 Score = 125 bits (138), Expect = 6e-24 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 |||||| ||||| || || || ||||||||||| || ||||| ||||| || || || Sbjct 25468359 CATGTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATC 25468418 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 || || || | | || ||||| | |||| | || |||||||| |||||||||| Sbjct 25468419 GCCTTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTC 25468478 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30402 |||||| || || || || | || ||||| |||| ||| || || |||| || |||||| Sbjct 25468479 CCAGATTTTCACGCCTTTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCA 25468538 Query 30403 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 | || ||| || | ||||| ||| || || | ||| || ||||| || || || Sbjct 25468539 GAACAACTCTTCTGCCACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406280203265016