Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq2511 159 9e-35 >seq2511 Length=1546 Score = 159 bits (176), Expect = 9e-35 Identities = 285/426 (67%), Gaps = 0/426 (0%) Strand=Plus/Plus Query 6 AAAACCGGACTGGGAGGCCATCGAGACGGCATACCGGGCCGGAGTGATGTCTCTCCGTGA 65 || ||| || ||||||||||||||| |||| ||||| || || |||||||| ||||| || Sbjct 1048 AAGACCAGATTGGGAGGCCATCGAGTCGGCTTACCGAGCTGGCGTGATGTCACTCCGAGA 1107 Query 66 AATTGCGTCACATCATGGTATTAGTGAAGGTGCTATCCGCAAGCGCGCAAAGCGTGATGA 125 ||| || ||||| |||||||| |||||| ||||| ||||| | |||||| ||||| Sbjct 1108 AATAGCTTCACAGCATGGTATATCTGAAGGCGCTATACGCAAAAGAGCAAAGAAGGATGA 1167 Query 126 CTGGTCCCGTGATCTTAACGCCAGGATTCAGCAAAAGGCTGATGATCTGGTACGCAAACA 185 ||||| || || |||||||| | ||| | || |||||| ||||||||||| | Sbjct 1168 ATGGTCGCGAGACCTTAACGCAAAGATAAAATCCCGTGCAGATGATTTGGTACGCAAAGA 1227 Query 186 GGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACAGAACGCGTACTGATAGAAGC 245 ||||| || |||| |||||||| || || || Sbjct 1228 GGAAGTACGCAAGCAGGTACGCAGCGAAACAGTACTTTCAGAGCGCGTACTTATTGAGGC 1287 Query 246 CACAGCGGAGGTAATAGCCTCGGTACGCATGGAGCACCGGGGCGATATTCGCCGGGCCCG 305 || || || || || || || |||||||| ||| ||||||||||||| |||| | Sbjct 1288 GACCGCCGAAGTCATCGCTAGTGTTCGCATGGAACACAGGGGCGATATTCGAAGGGCTAG 1347 Query 306 GGAACTCACAAACACGCTTTTTGATGAACTTGGTGCGCAGTGTGCTGATGTGGGGGCGCT 365 || || || || | | |||||||| || || | ||||| |||||| || | Sbjct 1348 AGAGCTAACCAATAACTTATTTGATGAGCTATCAGCTGAATGTGCCGATGTGCCAGCTTT 1407 Query 366 GGAGCAGCTGGGTGACATCATGTTCGCTCCTGACGATAAAGGCCGTGACCGGCTCAACGA 425 | |||| || | ||||| |||||| ||||| || || || ||| || || Sbjct 1408 AAGTAAATTGGGCGAGCTAATGTTTAGTCCTGATGATAACGGGCGCGATAAGCTAAATGA 1467 Query 426 AACTTA 431 || ||| Sbjct 1468 AATTTA 1473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130236968369752