Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq236 131 2e-25 >seq236 Length=27037145 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||||||||||||| |||||||| | ||| || |||||||| ||||| || | Sbjct 25468013 ACATGAGCGATCATGATGGTGAGCAGCGAGTAGGAGGCGATGTTGAATGGCACACCAAGG 25468072 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||| || || | || |||||| || || ||||| ||||| || | ||||||||| Sbjct 25468073 CCCATATCGCCGGCTCTTTGATAAAGATGACAGGAGAGCTCGCCGTCGTAGACGTAGAAC 25468132 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || ||| | |||||| || ||||| ||||| || | ||| |||||||||||| Sbjct 25468133 TGAGCGAGCGAGTGGCAGGGCGGGAGGGCCATTTTCGGAATGTCCACAGGGTTCCACGCG 25468192 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGT 6848 | ||| | || | ||||| || ||||| ||||| |||||||||||| Sbjct 25468193 CTCATTATTATTCGCCTGTCGTCCGGGTTGTTCTTCACCTTGTCGATCACGT 25468244 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 34497 ACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGA 34556 |||||||||||| ||||| ||||| || ||||| | || | ||| ||||||||| Sbjct 25468244 ACGTGATCGACAAGGTGAAGAACAACCCGGACGACAGGCGAATAATAATGAGCGCGTGGA 25468185 Query 34557 ACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACG 34616 |||| ||| | || ||||| ||||| || |||||| | ||| || ||||||| Sbjct 25468184 ACCCTGTGGACATTCCGAAAATGGCCCTCCCGCCCTGCCACTCGCTCGCTCAGTTCTACG 25468125 Query 34617 TCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGG 34676 || | || ||||| ||||| || || |||||| || | || || ||||| | || | Sbjct 25468124 TCTACGACGGCGAGCTCTCCTGTCATCTTTATCAAAGAGCCGGCGATATGGGCCTTGGTG 25468065 Query 34677 TGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 |||| |||||||| || ||| | |||||||| ||||||||||||||| Sbjct 25468064 TGCCATTCAACATCGCCTCCTACTCGCTGCTCACCATCATGATCGCTCATGT 25468013 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 |||| || |||||||| |||||||| || ||||| |||||||| | ||||| ||||| Sbjct 25468369 TACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCCTTCCTCG 25468428 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 ||| | || || | |||| || || |||| ||| ||| ||||||||||| ||| Sbjct 25468429 CGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTCCCAGATTTTC 25468488 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCC 7078 || || || ||| |||||||||| ||| || | || | | |||||| | || ||| Sbjct 25468489 ACGCCTTTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCAGAACAACTCT 25468548 Query 7079 TCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125 || ||||| | |||| | || || ||||| || ||||| || || Sbjct 25468549 TCTGCCACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279 || || ||||| || ||||| || || | |||| | ||||| || ||| || | ||| Sbjct 25468595 TTACCACTGCTCACTACGAAGCGAGTATTCTGGCGAGCCGTGGCAGAAGAGTTGTTCTGG 25468536 Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339 ||| | | || | || ||| |||||||||| ||| || || ||||| ||||||||| Sbjct 25468535 TTCATCCGAGGCTCGACTAACGCCAAGGAGCTTTCGGCCAAAGGCGTGAAAATCTGGGAC 25468476 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGAC 34399 || ||| ||| |||| || || |||| | || || | ||| ||||| ||||| Sbjct 25468475 GCCAACGCGTCCAGAGAATTCCTCGACACCTGCGGCTTTCAGGATCGCGAGGAAGGCGAT 25468416 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 | |||||||| ||||| || |||||||| |||||||| || |||| Sbjct 25468415 CTCGGCCCGGTTTACGGCTTTCAGTGGAGGCACTTTGGCGCCAAGTA 25468369 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 34220 TTTCCGCTGCTGACGACGAA--ACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGT 34277 ||||| |||||||| || || |||| | ||| | |||||||||||| |||| | Sbjct 26890630 TTTCCTCTGCTGACAACCAAGAACGTTCTT--TGGCGTGCTGTGGTCGAGGAGTTGCTCT 26890687 Query 34278 GGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGG 34337 ||||| | | ||| |||| ||| | || ||||| | | || || || |||||| Sbjct 26890688 GGTTCATAAAGGGATCCACTAACGCAAAAGAGCTTGCCGACAAAGGCGTAAAAATCTGGA 26890747 Query 34338 ACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCG 34397 |||| | | || || || ||| |||| | |||||| | | | || ||||||| Sbjct 26890748 ACGCCAATAGTTCGCGTGAATTTTTGGATTCCTGCGGGTTCACCGATAGAGAAGAGGGCG 26890807 Query 34398 ACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 |||||||||| || || || ||||||||||| || || || || Sbjct 26890808 ACTTGGGCCCTGTATATGGCTTCCAGTGGAGGCATTTCGGAGC 26890850 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGAT 6964 || || || || ||||||||||| || || || ||||||||||||||||| || | | Sbjct 26890850 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 26890791 Query 6965 GGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 | |||||| | |||| ||| || || || | | |||| |||||| || || || Sbjct 26890790 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 26890731 Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084 | | ||||| || | ||| |||| ||| | | |||||| |||| |||||||||| Sbjct 26890730 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 26890671 Query 7085 ACGCCCTTCCAGTACACACGT--TTCGTCGTCAGCAGCGGAAA 7125 || | ||| | |||| || || |||||||| ||||| Sbjct 26890670 ACAGCACGCCA--AAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630 Score = 89.7 bits (98), Expect = 5e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 34478 GGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGG 34537 |||| |||||| ||||| | ||||| ||| | || || || |||||| || | Sbjct 26890960 GGAGTCGACCAGTTGCAGGATGTGATTAACAAAATAAAAAACAAACCGGATGACCGACGA 26891019 Query 34538 ATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCAC 34597 || | |||||||| ||||| || ||| | ||| | ||||| || || || || || Sbjct 26891020 ATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTATAATGGCTCTTCCTCCTTGTCAT 26891079 Query 34598 ACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCG 34657 | || ||||| | || || |||| ||| | || || ||||| |||||| || Sbjct 26891080 GCTCTGGTGCAATTTTGTGTAGCTGATGGAGAGTTATCTTGTCAGCTGTATCAAAGAAGT 26891139 Query 34658 GGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717 | || ||||| | || || || ||||||||||| ||| || ||||||| | |||| Sbjct 26891140 GCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTTATTCTTTGCTCACATGCATG 26891199 Query 34718 ATCGCTCAT 34726 || || ||| Sbjct 26891200 ATTGCCCAT 26891208 Score = 89.7 bits (98), Expect = 5e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 6619 ATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCC 6678 ||| || |||||| | ||||||| || ||| ||||||||||| || || || | || Sbjct 26891208 ATGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGACTCCAAGTCC 26891149 Query 6679 CATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTG 6738 ||| || | || |||||| ||||| || || | ||| |||| || || | ||||| Sbjct 26891148 CATATCAGCACTTCTTTGATACAGCTGACAAGATAACTCTCCATCAGCTACACAAAATTG 26891089 Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCA 6798 || | || || || || || ||||| | ||| | ||| || ||||| ||||| Sbjct 26891088 CACCAGAGCATGACAAGGAGGAAGAGCCATTATAGGAATATCTACTGGATTCCAGGCGCA 26891029 Query 6799 CATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTG 6858 ||| | || | || |||||| || || || | ||| ||||| | ||||| ||| Sbjct 26891028 CATTATTATTCGTCGGTCATCCGGTTTGTTTTTTATTTTGTTAATCACATCCTGCAACTG 26890969 Query 6859 GTCCGCTCC 6867 ||| |||| Sbjct 26890968 GTCGACTCC 26890960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448228231198560