Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq236 131 2e-25
>seq236
Length=27037145
Score = 131 bits (144), Expect = 2e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
||||||||||||||| |||||||| | ||| || |||||||| ||||| || |
Sbjct 25468013 ACATGAGCGATCATGATGGTGAGCAGCGAGTAGGAGGCGATGTTGAATGGCACACCAAGG 25468072
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736
||||| || || | || |||||| || || ||||| ||||| || | |||||||||
Sbjct 25468073 CCCATATCGCCGGCTCTTTGATAAAGATGACAGGAGAGCTCGCCGTCGTAGACGTAGAAC 25468132
Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796
|| ||| | |||||| || ||||| ||||| || | ||| ||||||||||||
Sbjct 25468133 TGAGCGAGCGAGTGGCAGGGCGGGAGGGCCATTTTCGGAATGTCCACAGGGTTCCACGCG 25468192
Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGT 6848
| ||| | || | ||||| || ||||| ||||| ||||||||||||
Sbjct 25468193 CTCATTATTATTCGCCTGTCGTCCGGGTTGTTCTTCACCTTGTCGATCACGT 25468244
Score = 131 bits (144), Expect = 2e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 34497 ACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGA 34556
|||||||||||| ||||| ||||| || ||||| | || | ||| |||||||||
Sbjct 25468244 ACGTGATCGACAAGGTGAAGAACAACCCGGACGACAGGCGAATAATAATGAGCGCGTGGA 25468185
Query 34557 ACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACG 34616
|||| ||| | || ||||| ||||| || |||||| | ||| || |||||||
Sbjct 25468184 ACCCTGTGGACATTCCGAAAATGGCCCTCCCGCCCTGCCACTCGCTCGCTCAGTTCTACG 25468125
Query 34617 TCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGG 34676
|| | || ||||| ||||| || || |||||| || | || || ||||| | || |
Sbjct 25468124 TCTACGACGGCGAGCTCTCCTGTCATCTTTATCAAAGAGCCGGCGATATGGGCCTTGGTG 25468065
Query 34677 TGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728
|||| |||||||| || ||| | |||||||| |||||||||||||||
Sbjct 25468064 TGCCATTCAACATCGCCTCCTACTCGCTGCTCACCATCATGATCGCTCATGT 25468013
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|||| || |||||||| |||||||| || ||||| |||||||| | ||||| |||||
Sbjct 25468369 TACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCCTTCCTCG 25468428
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
||| | || || | |||| || || |||| ||| ||| ||||||||||| |||
Sbjct 25468429 CGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTCCCAGATTTTC 25468488
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCC 7078
|| || || ||| |||||||||| ||| || | || | | |||||| | || |||
Sbjct 25468489 ACGCCTTTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCAGAACAACTCT 25468548
Query 7079 TCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125
|| ||||| | |||| | || || ||||| || ||||| || ||
Sbjct 25468549 TCTGCCACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279
|| || ||||| || ||||| || || | |||| | ||||| || ||| || | |||
Sbjct 25468595 TTACCACTGCTCACTACGAAGCGAGTATTCTGGCGAGCCGTGGCAGAAGAGTTGTTCTGG 25468536
Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339
||| | | || | || ||| |||||||||| ||| || || ||||| |||||||||
Sbjct 25468535 TTCATCCGAGGCTCGACTAACGCCAAGGAGCTTTCGGCCAAAGGCGTGAAAATCTGGGAC 25468476
Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGAC 34399
|| ||| ||| |||| || || |||| | || || | ||| ||||| |||||
Sbjct 25468475 GCCAACGCGTCCAGAGAATTCCTCGACACCTGCGGCTTTCAGGATCGCGAGGAAGGCGAT 25468416
Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
| |||||||| ||||| || |||||||| |||||||| || ||||
Sbjct 25468415 CTCGGCCCGGTTTACGGCTTTCAGTGGAGGCACTTTGGCGCCAAGTA 25468369
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/223 (70%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 34220 TTTCCGCTGCTGACGACGAA--ACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGT 34277
||||| |||||||| || || |||| | ||| | |||||||||||| |||| |
Sbjct 26890630 TTTCCTCTGCTGACAACCAAGAACGTTCTT--TGGCGTGCTGTGGTCGAGGAGTTGCTCT 26890687
Query 34278 GGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGG 34337
||||| | | ||| |||| ||| | || ||||| | | || || || ||||||
Sbjct 26890688 GGTTCATAAAGGGATCCACTAACGCAAAAGAGCTTGCCGACAAAGGCGTAAAAATCTGGA 26890747
Query 34338 ACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCG 34397
|||| | | || || || ||| |||| | |||||| | | | || |||||||
Sbjct 26890748 ACGCCAATAGTTCGCGTGAATTTTTGGATTCCTGCGGGTTCACCGATAGAGAAGAGGGCG 26890807
Query 34398 ACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440
|||||||||| || || || ||||||||||| || || || ||
Sbjct 26890808 ACTTGGGCCCTGTATATGGCTTCCAGTGGAGGCATTTCGGAGC 26890850
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/223 (70%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGAT 6964
|| || || || ||||||||||| || || || ||||||||||||||||| || | |
Sbjct 26890850 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 26890791
Query 6965 GGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024
| |||||| | |||| ||| || || || | | |||| |||||| || || ||
Sbjct 26890790 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 26890731
Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084
| | ||||| || | ||| |||| ||| | | |||||| |||| ||||||||||
Sbjct 26890730 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 26890671
Query 7085 ACGCCCTTCCAGTACACACGT--TTCGTCGTCAGCAGCGGAAA 7125
|| | ||| | |||| || || |||||||| |||||
Sbjct 26890670 ACAGCACGCCA--AAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630
Score = 89.7 bits (98), Expect = 5e-13
Identities = 169/249 (68%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 34478 GGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGG 34537
|||| |||||| ||||| | ||||| ||| | || || || |||||| || |
Sbjct 26890960 GGAGTCGACCAGTTGCAGGATGTGATTAACAAAATAAAAAACAAACCGGATGACCGACGA 26891019
Query 34538 ATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCAC 34597
|| | |||||||| ||||| || ||| | ||| | ||||| || || || || ||
Sbjct 26891020 ATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTATAATGGCTCTTCCTCCTTGTCAT 26891079
Query 34598 ACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCG 34657
| || ||||| | || || |||| ||| | || || ||||| |||||| ||
Sbjct 26891080 GCTCTGGTGCAATTTTGTGTAGCTGATGGAGAGTTATCTTGTCAGCTGTATCAAAGAAGT 26891139
Query 34658 GGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717
| || ||||| | || || || ||||||||||| ||| || ||||||| | ||||
Sbjct 26891140 GCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTTATTCTTTGCTCACATGCATG 26891199
Query 34718 ATCGCTCAT 34726
|| || |||
Sbjct 26891200 ATTGCCCAT 26891208
Score = 89.7 bits (98), Expect = 5e-13
Identities = 169/249 (68%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 6619 ATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCC 6678
||| || |||||| | ||||||| || ||| ||||||||||| || || || | ||
Sbjct 26891208 ATGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGACTCCAAGTCC 26891149
Query 6679 CATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTG 6738
||| || | || |||||| ||||| || || | ||| |||| || || | |||||
Sbjct 26891148 CATATCAGCACTTCTTTGATACAGCTGACAAGATAACTCTCCATCAGCTACACAAAATTG 26891089
Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCA 6798
|| | || || || || || ||||| | ||| | ||| || ||||| |||||
Sbjct 26891088 CACCAGAGCATGACAAGGAGGAAGAGCCATTATAGGAATATCTACTGGATTCCAGGCGCA 26891029
Query 6799 CATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTG 6858
||| | || | || |||||| || || || | ||| ||||| | ||||| |||
Sbjct 26891028 CATTATTATTCGTCGGTCATCCGGTTTGTTTTTTATTTTGTTAATCACATCCTGCAACTG 26890969
Query 6859 GTCCGCTCC 6867
||| ||||
Sbjct 26890968 GTCGACTCC 26890960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448228231198560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |