Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq158 95.1 9e-15
>seq158
Length=288468
Score = 95.1 bits (104), Expect = 9e-15
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| || || |||||||| ||| ||||| | || |||||| |
Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| |||| | ||| ||||| ||||| |||||||||||| |||| || |
Sbjct 89709 GATACGATTGAGAAT--GTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATC 89766
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| || | |||||||| || || ||| | || || | ||||| ||||| || ||||
Sbjct 89767 AGCAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACA 89826
Query 27968 ACATCCAAAAAGA 27980
|||| ||||| ||
Sbjct 89827 ACATTCAAAAGGA 89839
Score = 95.1 bits (104), Expect = 9e-15
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| || || ||||| ||| | || || ||| || ||| |||| ||||| | |
Sbjct 91701 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91760
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| |||| | ||| ||||| ||||| |||||||| || | ||| || |
Sbjct 91761 GATACGATCGAAAAT--GTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCGCCAGACC 91818
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| || ||||| |||||||||||||||||||| || | || | | ||||| ||||
Sbjct 91819 AGCAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCTCCGACTACA 91878
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGT 28005
| ||||| |||||| ||| | || ||||| || |||
Sbjct 91879 ATATCCAGAAAGAGTCGACTCTCCACTTGGTCTTACGT 91916
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/234 (68%), Gaps = 14/234 (6%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || || || ||| | ||||| || ||||| |||| || ||| | ||
Sbjct 90105 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACCATTACCCTTGAAGTTGAAGCCTCC 90164
Query 27850 GACGATGTACAATCGGTCAAACAAAAA-----ATAGCC--GACAAAGAAGGTGTTCCGAT 27902
||| ||||| | |||| ||| | | || ||||| |||||| ||||
Sbjct 90165 GAC-----ACAATTGA--AAACGTAAAGGCTAAGATCCAAGACAAGGAAGGTATTCCCCC 90217
Query 27903 GGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGA 27962
|| ||||| || ||||| ||||| ||||| ||| | || || | || | ||||||||
Sbjct 90218 AGATCAGCAGCGTTTAATCTTTGCTGGAAAGCAACTCGAGGATGGGCGAACTTTGTCCGA 90277
Query 27963 TTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||| || |||||| ||| | || ||||| | || | ||||| ||
Sbjct 90278 TTACAACATTCAGAAAGAGTCTACTCTCCACTTGGTACTTCGACTTCGTGGAGG 90331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355835952528846
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |