Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq158 95.1 9e-15 >seq158 Length=288468 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| || || |||||||| ||| ||||| | || |||||| | Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| ||||| ||||| |||||||||||| |||| || | Sbjct 89709 GATACGATTGAGAAT--GTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATC 89766 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | |||||||| || || ||| | || || | ||||| ||||| || |||| Sbjct 89767 AGCAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACA 89826 Query 27968 ACATCCAAAAAGA 27980 |||| ||||| || Sbjct 89827 ACATTCAAAAGGA 89839 Score = 95.1 bits (104), Expect = 9e-15 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || ||||| ||| | || || ||| || ||| |||| ||||| | | Sbjct 91701 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91760 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| ||||| ||||| |||||||| || | ||| || | Sbjct 91761 GATACGATCGAAAAT--GTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCGCCAGACC 91818 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || ||||| |||||||||||||||||||| || | || | | ||||| |||| Sbjct 91819 AGCAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCTCCGACTACA 91878 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGT 28005 | ||||| |||||| ||| | || ||||| || ||| Sbjct 91879 ATATCCAGAAAGAGTCGACTCTCCACTTGGTCTTACGT 91916 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/234 (68%), Gaps = 14/234 (6%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || || ||| | ||||| || ||||| |||| || ||| | || Sbjct 90105 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACCATTACCCTTGAAGTTGAAGCCTCC 90164 Query 27850 GACGATGTACAATCGGTCAAACAAAAA-----ATAGCC--GACAAAGAAGGTGTTCCGAT 27902 ||| ||||| | |||| ||| | | || ||||| |||||| |||| Sbjct 90165 GAC-----ACAATTGA--AAACGTAAAGGCTAAGATCCAAGACAAGGAAGGTATTCCCCC 90217 Query 27903 GGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGA 27962 || ||||| || ||||| ||||| ||||| ||| | || || | || | |||||||| Sbjct 90218 AGATCAGCAGCGTTTAATCTTTGCTGGAAAGCAACTCGAGGATGGGCGAACTTTGTCCGA 90277 Query 27963 TTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||| || |||||| ||| | || ||||| | || | ||||| || Sbjct 90278 TTACAACATTCAGAAAGAGTCTACTCTCCACTTGGTACTTCGACTTCGTGGAGG 90331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355835952528846