Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq236 134 1e-26 >seq236 Length=27037145 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||||||||||||||| || || || || |||| ||| |||||||| || | || Sbjct 26890846 CGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCGGTGA 26890787 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 | || | |||||||| || | |||| ||||||| |||||| ||||| || || | Sbjct 26890786 ACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCTTTGT 26890727 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194 ||| |||||||| | ||| ||||| || | | |||||| |||| |||||| || || | Sbjct 26890726 CGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACCACAG 26890667 Query 30195 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 | ||||| || ||||||| || || || ||||| Sbjct 26890666 CACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || ||||||||||| || ||||| ||||| || || || || || || | | || ||| Sbjct 25468381 AAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCCTTCCTCGCGATCCTGAAAG 25468440 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || | |||| | || |||||||| |||||||||||||||| || || || || | Sbjct 25468441 CCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTCCCAGATTTTCACGCCTTTGGCC 25468500 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 || ||||| |||| ||| || || |||| || |||||| | || ||| || | ||||| Sbjct 25468501 GAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCAGAACAACTCTTCTGCCACGGCT 25468560 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 ||| || || | ||| || ||||| || || || Sbjct 25468561 CGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406133014204828