Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq236 134 1e-26
>seq236
Length=27037145
Score = 134 bits (148), Expect = 1e-26
Identities = 160/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074
||||||||||||||||||| || || || || |||| ||| |||||||| || | ||
Sbjct 26890846 CGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCGGTGA 26890787
Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134
| || | |||||||| || | |||| ||||||| |||||| ||||| || || |
Sbjct 26890786 ACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCTTTGT 26890727
Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194
||| |||||||| | ||| ||||| || | | |||||| |||| |||||| || || |
Sbjct 26890726 CGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACCACAG 26890667
Query 30195 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231
| ||||| || ||||||| || || || |||||
Sbjct 26890666 CACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630
Score = 118 bits (130), Expect = 9e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| ||||||||||| || ||||| ||||| || || || || || || | | || |||
Sbjct 25468381 AAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCCTTCCTCGCGATCCTGAAAG 25468440
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
|| | |||| | || |||||||| |||||||||||||||| || || || || |
Sbjct 25468441 CCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTCCCAGATTTTCACGCCTTTGGCC 25468500
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196
|| ||||| |||| ||| || || |||| || |||||| | || ||| || | |||||
Sbjct 25468501 GAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCAGAACAACTCTTCTGCCACGGCT 25468560
Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231
||| || || | ||| || ||||| || || ||
Sbjct 25468561 CGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406133014204828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |