Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq236 138 8e-28
>seq236
Length=27037145
Score = 138 bits (152), Expect = 8e-28
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564
||||||||||||||||| ||||| || || || || |||| ||| |||||||| || |
Sbjct 26890850 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 26890791
Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624
||| || | |||||||| || | |||| ||||||| |||||| ||||| ||
Sbjct 26890790 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 26890731
Query 27625 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 27684
|| |||| |||||||| | ||| ||||| || | | |||||| |||| |||||| ||
Sbjct 26890730 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 26890671
Query 27685 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725
|| || ||||| || ||||||| || || || |||||
Sbjct 26890670 ACAGCACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 26890630
Score = 122 bits (134), Expect = 6e-23
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
|||||| ||||| || || || |||||||| || || ||||| ||||| || || ||
Sbjct 25468359 CATGTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATC 25468418
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
|| || || | | || ||||| | |||| | || |||||||| ||||||||||
Sbjct 25468419 GCCTTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTC 25468478
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668
|||||| || || || || | || ||||| |||| ||| || || |||| || ||||||
Sbjct 25468479 CCAGATTTTCACGCCTTTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCA 25468538
Query 27669 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725
| || ||| || | ||||| ||| || || | ||| || ||||| || || ||
Sbjct 25468539 GAACAACTCTTCTGCCACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369479738455838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |