Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 203 5e-47 seq14 141 1e-28 >seq1 Length=33571687 Score = 203 bits (224), Expect = 5e-47 Identities = 320/456 (70%), Gaps = 2/456 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 |||||||| ||||||||||||||| |||||||| ||||||| ||| ||||| || | Sbjct 24628368 TCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 24628427 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || | || || ||||| ||||| || | || || ||||||| |||| || Sbjct 24628428 CACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGCATAGAAA 24628487 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 || |||| | ||| | |||||| || ||||| |||||||| ||||||||||| || | Sbjct 24628488 AGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAAG 24628547 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 || |||| |||||| ||||| | ||| || || | ||||||||| || || || || Sbjct 24628548 ATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACCT 24628607 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 ||||| | || | || |||||||| || ||||| | ||| |||| | ||| |||||| Sbjct 24628608 TGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGAT 24628667 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 || ||||| |||||||| | | ||| | || | ||| | || | || Sbjct 24628668 ACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACCA 24628727 Query 78285 ATTCCTCCTGCCATCTTAGAT-ATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343 || || || | || || | | | || ||| || | |||| |||||| || || || || Sbjct 24628728 ATGCCACCAG-CAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 24628786 Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 |||||||| || |||| ||||||| ||||| || Sbjct 24628787 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822 Score = 192 bits (212), Expect = 8e-44 Identities = 313/448 (70%), Gaps = 7/448 (2%) Strand=Plus/Plus Query 76896 GCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATT 76955 ||||| || | ||| | |||||| ||||| ||||| || |||| ||| || |||||| Sbjct 24627100 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 24627159 Query 76956 TTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCT 77015 || | |||||||||||| | ||| ||||| | |||||| | | || || | ||||| Sbjct 24627160 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCA 24627219 Query 77016 GGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCA 77072 |||| ||| | || |||| ||||| | || || ||| |||||| || || Sbjct 24627220 GGAATCCTTGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 24627279 Query 77073 TCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 || | ||||| | ||| ||||| || || | | | ||||||||| || | || ||| Sbjct 24627280 TCGTCCCACAGATCCCTGTCTGTCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAAT 24627339 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 |||||||| | || | | |||||||| || || || || || || | ||||| ||| Sbjct 24627340 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 24627399 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 || ||||||||||| || || ||||| |||||||| || || | || ||| ||| | Sbjct 24627400 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 24627459 Query 77253 AGACCATGTGTTCTG--ATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTA 77310 | |||| ||||||| |||||| |||| || |||| ||||| ||| | ||| Sbjct 24627460 ACACCA--TGTTCTGCAATTTTAGCTTTCAGGGCAGTCCAGTCCCAGAGACTGGTTGGTG 24627517 Query 77311 CAACATCCCAAAGATCGTATTGTAGAAT 77338 |||| ||| | |||||||||| ||| Sbjct 24627518 TTACATTCCACATGTCGTATTGTAAAAT 24627545 >seq14 Length=421909 Score = 141 bits (156), Expect = 1e-28 Identities = 135/173 (78%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 || || || ||||||| ||| | || |||| ||||||| | | | | ||| |||||| Sbjct 277594 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277535 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || || |||||||| ||||| || | | ||||||||||||||| || || || ||| Sbjct 277534 ACAATAATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277475 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGC 77233 || ||||||||||||||||| || ||||| |||||||| |||||||| ||||| Sbjct 277474 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTTGGCATTGGTGC 277422 Score = 134 bits (148), Expect = 2e-26 Identities = 228/328 (70%), Gaps = 8/328 (2%) Strand=Plus/Minus Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583 |||||| ||||| || | |||||| ||| ||||| | ||||||| ||| | Sbjct 276964 TACCAACTGGTCTGTGCATTAAATTGGATTTTTCTGCTTCGATGAGTGGATAATGATTCA 276905 Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643 || |||||||||| | ||| || |||| |||||| || || || | ||| |||| Sbjct 276904 GATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCTTTCAATTTTAGAA 276845 Query 77644 AATCAAA------TCTTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTAC 77697 ||| | | || || | ||||||||| || | ||| || ||||||| ||||| Sbjct 276844 AATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATGGATGCTAAATTAC 276785 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 | |||||||| || || | | |||||||| || || || |||| |||||| | || Sbjct 276784 ACACTGCTACTTCGTTTGGAGAAGAGTATTGTATAATTTCAGTGCATAAATTACTGCTTT 276725 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATA 77816 | ||||| || ||||||||||| || || |||||| ||| || ||||| || ||| Sbjct 276724 TAATAGTTCCAAGATTTTGTTGATTTGATTTACGATTGCAGTGA-TCTTTATAGAGCATA 276666 Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATT 77844 | ||||| || ||||||| |||| || Sbjct 276665 TAAGGAGTTCCAGTTTCAACTTGTGCTT 276638 Score = 114 bits (126), Expect = 2e-20 Identities = 198/281 (70%), Gaps = 5/281 (2%) Strand=Plus/Minus Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAA-TGTCGGAGATGCATGCGT 78433 || || |||||||| || || | ||| | |||| ||| || ||| ||||||||||| || Sbjct 275836 CACCTGGACATTTGTTGGTGTATAGTACATGCAAAAAAAAAGTGTAGGAGATGCATGTGT 275777 Query 78434 AAACCATTTTTCAGAAAGTAGA-TTGTATGTTTCAATAGCTGATTCTATGTCCCATTGAT 78492 || | ||||||| ||| | || ||||| || || || ||| | ||| || || Sbjct 275776 GAAGTAACGTTCAGAA-GTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTAT 275718 Query 78493 GAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATT-ATTT 78551 ||| |||| || || | ||| | ||||| || |||| |||||| ||| | ||| Sbjct 275717 GAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGGTCGCTCAACCA-CTTGTCCATTA 275659 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 78611 || | || ||||| ||| ||||| |||||||| ||||||||||| | ||| ||| Sbjct 275658 ATCCTGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCT 275599 Query 78612 CTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 || || || || ||||||||||| ||||||| | ||| Sbjct 275598 CTGTCATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTT 275558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694615848870720