Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 192 8e-44 seq14 147 3e-30 seq410 91.5 2e-13 >seq1 Length=33571687 Score = 192 bits (212), Expect = 8e-44 Identities = 328/476 (69%), Gaps = 0/476 (0%) Strand=Plus/Plus Query 76499 TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACAT 76558 ||||| | | | ||||| |||||||| ||||||||||||||| || ||||||||| Sbjct 24628347 TCATACTTTATGTATAATTTATCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACAT 24628406 Query 76559 TCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCA 76618 |||| |||||||| || ||||| || || ||| | ||||| || | || Sbjct 24628407 TCATGTGGACACATTAAACTCCACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCC 24628466 Query 76619 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTT 76678 || ||||||| |||| || || |||| | ||| |||||| || ||||| |||||| Sbjct 24628467 GGGATCCATAAAGCATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTT 24628526 Query 76679 TTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACA 76738 || ||||| || || || | || |||| |||||| ||||| | ||| || || | | Sbjct 24628527 TTGAGATCGAGAAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCT 24628586 Query 76739 CCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAAC 76798 || |||| || || || || ||||| | || | ||||||||||| || ||||| | | Sbjct 24628587 CCAGGTCTCTTGTTTCCACCTTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATC 24628646 Query 76799 ATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGA 76858 || |||| | || |||||| ||| ||||| |||||||| | | ||| || | Sbjct 24628647 ATAGGAACTAAACCATTAGATACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTT 24628706 Query 76859 ATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTC 76918 ||| | || | | || || || || || ||| || || |||||| | ||| Sbjct 24628707 ATAGTGTGAACACTCAAACCAATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTC 24628766 Query 76919 AATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 | ||| ||||| || || || ||||| || || |||| ||||||| ||||| || Sbjct 24628767 AGTGTATCATAAATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822 Score = 183 bits (202), Expect = 4e-41 Identities = 311/448 (69%), Gaps = 7/448 (2%) Strand=Plus/Plus Query 75491 GCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATT 75550 ||||| || | ||| | |||||| ||||| ||||| || |||| ||| || |||||| Sbjct 24627100 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 24627159 Query 75551 TTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCT 75610 || | |||||||||||| | ||| ||||| | |||||| | | || || | ||||| Sbjct 24627160 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCA 24627219 Query 75611 GGAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCA 75667 |||| ||| | || |||| || ||| | | || ||| |||||| ||||| Sbjct 24627220 GGAATCCTTGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 24627279 Query 75668 TCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAAT 75727 || | ||||| | || || || || || | | | ||||||||| || | || ||| Sbjct 24627280 TCGTCCCACAGATCCCTGTCTGTCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAAT 24627339 Query 75728 TCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 75787 |||||||| | || | | |||||||| || || || || || || | ||||| ||| Sbjct 24627340 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 24627399 Query 75788 TTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTG 75847 || ||||||||||| || || ||||| || ||||| || || | || ||| ||| | Sbjct 24627400 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 24627459 Query 75848 AGACCATGTGTTCTG--ATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTA 75905 | |||| ||||||| |||||| |||| || |||| ||||| ||| | |||| Sbjct 24627460 ACACCA--TGTTCTGCAATTTTAGCTTTCAGGGCAGTCCAGTCCCAGAGACTGGTTGGTG 24627517 Query 75906 CAACATCCCAGAGATCGTATTGTAGAAT 75933 |||| ||| | |||||||||| ||| Sbjct 24627518 TTACATTCCACATGTCGTATTGTAAAAT 24627545 Score = 138 bits (152), Expect = 2e-27 Identities = 225/320 (70%), Gaps = 8/320 (3%) Strand=Plus/Plus Query 76118 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTA 76177 |||||||| || || || ||| | ||||| |||| |||||||| || ||||| ||||| Sbjct 24627886 ATACCAATGGGCCTGTGCCTCGTGTTGGACCTTTCTGCTTCTGGGATGGGGTAGTAATTT 24627945 Query 76178 ATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGA 76237 | || |||||||||| | |||||| ||||| | || ||||| ||||| | Sbjct 24627946 AGGTCAATAATTTTATCCAAATTTCTTGTTGTGACTTTTGCGACTTCCTTAAGTTTTGCA 24628005 Query 76238 AAATCAAA-----TTTTCCATCTATC-ACAAACATATTAAGAGCTATAGATGCTAGATTA 76291 ||||| | |||| | ||| ||||||||||||| || |||||||||| ||| Sbjct 24628006 AAATCGTACGTTTTTTTACTGGTATTTACAAACATATTAACGGCAATAGATGCTAAATTG 24628065 Query 76292 CAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACAC 76351 || |||||||| || | | | | ||| || | | |||||||||| |||||| | Sbjct 24628066 CACACGGCTACTTCGTCTGGAGAAGAATACTGCACAACTTCCGTGCATAAATTACTGCTT 24628125 Query 76352 TTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAAC 76410 ||||||| ||||| |||||||| ||| || ||||| ||| || || || | | Sbjct 24628126 CTGATAGTACCAAGGTTTTGTTGATTGGATTTGCGATTACAGTGA-TCTTTGTATAACAT 24628184 Query 76411 AAACGGAGTTCCAGTTTCAA 76430 | || ||||||||||||| Sbjct 24628185 GTAAGGGGTTCCAGTTTCAA 24628204 >seq14 Length=421909 Score = 147 bits (162), Expect = 3e-30 Identities = 233/329 (71%), Gaps = 10/329 (3%) Strand=Plus/Minus Query 76119 TACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAA 76178 |||||| ||||| || | |||||| |||| ||||| | || |||| ||| | Sbjct 276964 TACCAACTGGTCTGTGCATTAAATTGGATTTTTCTGCTTCGATGAGTGGATAATGATTCA 276905 Query 76179 TATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAA 76238 ||| |||||||||| | ||| | |||| |||||| || || || | ||| |||| Sbjct 276904 GATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCTTTCAATTTTAGAA 276845 Query 76239 AATCAAATT------TTCCATCTATCA-CAAACATATTAAGAGCTATAGATGCTAGATTA 76291 ||| | | || || | |||| |||||||||||| ||| || ||||||| |||| Sbjct 276844 AATTGTAGTACTGTGTTTCAAC-ATCAACAAACATATTAACAGCAATGGATGCTAAATTA 276786 Query 76292 CAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACAC 76351 || || ||||| || || | | | |||||||| || || ||||||| |||||| | Sbjct 276785 CACACTGCTACTTCGTTTGGAGAAGAGTATTGTATAATTTCAGTGCATAAATTACTGCTT 276726 Query 76352 TTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAAC 76410 || |||||||||||||||||||| || || || || ||| || ||||| || | Sbjct 276725 TTAATAGTTCCAAGATTTTGTTGATTTGATTTACGATTGCAGTGA-TCTTTATAGAGCAT 276667 Query 76411 AAACGGAGTTCCAGTTTCAATCTGTGATT 76439 | | |||||||||||||||| |||| || Sbjct 276666 ATAAGGAGTTCCAGTTTCAACTTGTGCTT 276638 Score = 141 bits (156), Expect = 1e-28 Identities = 135/173 (78%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 || || || ||||||| ||| | ||||||| |||||| | | | | ||| |||||| Sbjct 277594 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277535 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 ||||| |||||||| ||||| || | || ||||||||||||||| || || || ||| Sbjct 277534 ACAATAATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277475 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGC 75828 || ||||||||||||||||| || ||||| || ||||| || ||||| ||||| Sbjct 277474 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTTGGCATTGGTGC 277422 Score = 120 bits (132), Expect = 4e-22 Identities = 199/281 (71%), Gaps = 5/281 (2%) Strand=Plus/Minus Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAA-TGTAGGAGATGCATGAGT 77028 || || |||||||| || || | ||| | |||| ||| || ||||||||||||||| || Sbjct 275836 CACCTGGACATTTGTTGGTGTATAGTACATGCAAAAAAAAAGTGTAGGAGATGCATGTGT 275777 Query 77029 GAACCATTTTTCAGAAAGTAGA-TTGTATGTTTCAATAACTGCTTCTATATCCCATTGAT 77087 ||| | ||||||| ||| | || ||||| || || ||| ||| | |||| || || Sbjct 275776 GAAGTAACGTTCAGAA-GTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTAT 275718 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATT-ATTT 77146 ||| |||| || || | ||| | ||||| || ||||| || || ||| | ||| Sbjct 275717 GAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGGTCGCTCAACCA-CTTGTCCATTA 275659 Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206 || | || ||||| ||| ||||| |||||||| ||||||||||| | ||| ||| Sbjct 275658 ATCCTGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCT 275599 Query 77207 CTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247 || || || || | ||||||||| | || |||| ||| Sbjct 275598 CTGTCATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTT 275558 Score = 98.7 bits (108), Expect = 1e-15 Identities = 210/311 (68%), Gaps = 2/311 (1%) Strand=Plus/Minus Query 76671 TATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 76730 |||| ||||| | ||| ||||| || | |||||| | |||||| || |||||||| | | Sbjct 276223 TATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGATAAAGAG 276164 Query 76731 CCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAA 76790 | | |||| || | ||| || || || ||||| ||| | | | || || || | | Sbjct 276163 CAAATGCACCAGGCCTTTTGTTTCCACCTTGATCAATAAAGCGTACTGTATTGTTGAATA 276104 Query 76791 CTCTCAACATTGGAA-TAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 |||| | ||| || | |||| | || | | ||||| | | || ||| | |||| Sbjct 276103 CTCTGATCATAGGTACTAATCCATTTGCAAAT-CCATTATTGCTAGCAATCGCAGTTCCT 276045 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 || | ||||||| || | || || || || ||||| ||| || | ||| Sbjct 276044 TTAGCTCTAATATTATGAACACTTATACCAATACCACCTGCGGATTTGCTAATAATTGCA 275985 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 || | || ||||| || | || || ||||||||||| || |||||| |||||| |||| Sbjct 275984 CATCTCTTTAATGTTTCGAAAATTCCTTCTATACTATCTTCAATCATGGTAAGAATAAAA 275925 Query 76970 CAGCTAGACAT 76980 || ||| |||| Sbjct 275924 CAACTAAACAT 275914 >seq410 Length=4553683 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980 |||||||| || |||||||||||||| |||| ||| || || || || || | || ||| Sbjct 2615930 TACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAGCGAGCCTCA 2615871 Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTA 47040 || | ||| || || | || || ||| || ||||||||| || || ||||| Sbjct 2615870 GTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCCGAG 2615811 Query 47041 GCAGCAAAAAATGCCAATACATG 47063 |||||||| |||||||| ||||| Sbjct 2615810 GCAGCAAAGAATGCCAAAACATG 2615788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712880056575360