Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq2807 152 1e-32 seq5024 107 5e-19 >seq2807 Length=852 Score = 152 bits (168), Expect = 1e-32 Identities = 323/482 (67%), Gaps = 0/482 (0%) Strand=Plus/Plus Query 5448 GATAACGCCTACAACGGCATGACGCTCCGCGAACTGGCCCGTGCCTCGCTGGTCGATCGC 5507 ||||||||||| ||| ||||||| || || || | || || || || ||| || || Sbjct 307 GATAACGCCTATAACAGCATGACACTGCGTGAGTTAGCACGCGCATCACTGACGGAGCGT 366 Query 5508 GGGATCGGCGTGGCCTCGCTCAACGCGCCGCAAATGGTCGGCTTGGCCTTCACCCACACT 5567 || | |||||||| || || || ||||||| | || ||||||| || |||| Sbjct 367 GGTGTTGGCGTGGCTACGTATAATCCGATGCAAATGATTGGTATGGCCTTTACGCACAGC 426 Query 5568 TCCAGCGACTTCGGCCTGATCCTTCTGGATGTCGCCAACAAGTCGGTGCTGGCTGGCTGG 5627 || || ||||| ||||| ||||||||||| || || || | || ||| ||| Sbjct 427 ACCTCTGATTTCGGTAATATCCTGCTGGATGTCGCGAATAAAGCGATTTTGCTTGGTTGG 486 Query 5628 GAAGAGGCCGAAGAAACCTTCCCGCTGTGGACCAAGCCCGGCATTCTCACTGACTTCAAG 5687 ||||| || |||||||| ||||| || || |||| |||||| || Sbjct 487 GAAGAAAATGACGAAACCTTTGGAAAATGGACGAAAAAAGGACAACTCAGTGACTTTAAA 546 Query 5688 CCGGCGCGCCGCGTCGGGCTGGGCGAGTTTTCCTCGCTGCGTCAAGTGCGTGAGGGCGCC 5747 | || | || || ||| | || | ||| | || | ||| |||||||||| ||||| Sbjct 547 ACTGCACATCGTGTGGGGTTAGGGGCGTTCCCTTCATTACGTAAAGTGCGTGAAGGCGCT 606 Query 5748 GAGTACAAGTACGTCACCCTCGGCGAGCGCGGCGAACAGATCATCCTGGCCACCTACGGA 5807 ||||| || ||||| || | ||| |||||| ||| ||||| || ||||| Sbjct 607 GAGTATAAATACGTTACGTTGAACGATAAAGGCGAAACCATCGCGCTGGCAACTTACGGT 666 Query 5808 GAGCTGTTCAGCATCACCCGTCAGGCGATCATCAACGACGACCTGCAGATGCTCTCGGAT 5867 || | ||||| || | |||||| || || ||||| || ||| || | ||| | ||||| Sbjct 667 GAATTATTCAGTATTAGCCGTCAAGCTATTATCAATGATGACATGAATATGTTGACGGAT 726 Query 5868 ATCCCGTTCAAGCTGGGCCAGGCTGCCAAGGCCACCATCGGCGACCTGGTCTATGCGGTT 5927 | || || | || | || || || ||||||||||| || |||| |||||||| Sbjct 727 GTACCAAAGAAATTAGGTGAAGCAGCGAAAGCCACCATCGGTGATTTGGTGTATGCGGTA 786 Query 5928 CT 5929 || Sbjct 787 CT 788 >seq5024 Length=742 Score = 107 bits (118), Expect = 5e-19 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 4584 ATCAACCTGCACATCCACTCCCCGGGCGGCGACGTCTTCGAGGGGACGGCGATCTATAAC 4643 ||||| ||||| || |||||||| || || || || || || || | || || |||||| Sbjct 514 ATCAATCTGCATATTCACTCCCCCGGTGGTGAAGTGTTTGATGGTATCGCCATTTATAAC 573 Query 4644 CTGCTGCGCAACCACCCGGCCAGCGTCGACGTGTACATCGATGGCTTGGCTGCCTCGATG 4703 | || |||||| | || | | || || |||||||| ||||| ||||| ||| Sbjct 574 CAACTTAAAAACCACTCTGCAACAATTACGGTTTATATCGATGGTTTGGCCGCCTCAATG 633 Query 4704 GCCTCGGTCATCGCCATGGCCGGCGACACCATCTACATGCCCGAGAACGCCATGATGATG 4763 ||||| || || || |||| ||| || || || ||||| | || |||||||||||| Sbjct 634 GCCTCAGTTATTGCGATGGTCGGGGATACGGTCATTATGCCGAAAAATGCCATGATGATG 693 Query 4764 GTGCATAAGCCCTGGGGCATC-CAGGGCGGCGATGCGGACGACATGCG 4810 | || || || ||||| || || || || |||||| | || ||||| Sbjct 694 ATCCACAAACCGTGGGGTGTCTCATGG-GGAGATGCGAATGATATGCG 740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138354780485964