Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq335 102 7e-17
seq158 89.7 4e-13
>seq335
Length=1594555
Score = 102 bits (112), Expect = 7e-17
Identities = 163/230 (71%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||||||||| ||||| || || |||||||| ||||| || |
Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| || | | | || ||| || ||| |||||||||||| | || || |||
Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAA-GAT-TCTAAAACTATGGCCGATTATA 111277
||| | || || | ||| || |||||| ||||| ||| | |||| || | ||||| |
Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994
Query 111278 ATAT-ACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
| || ||||||||||| ||||| ||| | || | ||||| || |||||
Sbjct 905995 ACATCCCAAAAAGAATCAACACTCCATCTTGTTCTTCGTCTTCGAGGTGG 906044
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| || || |||| || |||||||| || |||| ||| |
Sbjct 905587 ATGCAAATTTTTGTAAAGACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA 905646
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | || ||| ||||| ||||||||||| | || ||||||
Sbjct 905647 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905706
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| | || |||| || || || ||| |||||||| | ||| | | ||||| |||
Sbjct 905707 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACACTATCAGATTACAAT 905766
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
|| ||||||||||| || || ||| | || | ||||| || || ||||
Sbjct 905767 ATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGGCA 905815
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 111083 TTTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCG 111142
||||| || || || ||||| || ||||| ||||| ||||| ||||||||||| ||
Sbjct 904886 TTTATTTCAGCTTCAAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTC 904945
Query 111143 TGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAG 111202
||||| ||| || || | ||| | || ||| ||||| |||||||| |
Sbjct 904946 TGGAAGTGGAGGCCTCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGG 905005
Query 111203 GCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAA 111262
| |||| ||||| || | ||||| | ||| || |||||||| |||||| |
Sbjct 905006 GAATTCCTCCAGATCAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTA 905065
Query 111263 CTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCT 111317
|| | | || || ||||| || || || || || || || || || |||||||
Sbjct 905066 CTCTTTCTGACTACAATATTCAGAAGGAGTCAACTCTTCACTTGGTCCTGCGTCT 905120
>seq158
Length=288468
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| || ||| | || |||||||| ||||| ||||| ||| |
Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | || || |||||| ||||||||||| |||| |||||
Sbjct 89709 GATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 89768
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| ||||| |||| ||| || || ||| | |||||| || || | || || ||
Sbjct 89769 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAAC 89828
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| ||||| ||||| || | || | || || ||||||||
Sbjct 89829 ATTCAAAAGGAATCCACACTTCACCTTGTACTTCGACTTCGCGGTGG 89875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421779851255248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |