Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq335 102 7e-17 seq158 89.7 4e-13 >seq335 Length=1594555 Score = 102 bits (112), Expect = 7e-17 Identities = 163/230 (71%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||||||||| ||||| || || |||||||| ||||| || | Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || | | | || ||| || ||| |||||||||||| | || || ||| Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAA-GAT-TCTAAAACTATGGCCGATTATA 111277 ||| | || || | ||| || |||||| ||||| ||| | |||| || | ||||| | Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994 Query 111278 ATAT-ACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || ||||||||||| ||||| ||| | || | ||||| || ||||| Sbjct 905995 ACATCCCAAAAAGAATCAACACTCCATCTTGTTCTTCGTCTTCGAGGTGG 906044 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || || |||| || |||||||| || |||| ||| | Sbjct 905587 ATGCAAATTTTTGTAAAGACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA 905646 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| ||||| ||||||||||| | || |||||| Sbjct 905647 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905706 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | || |||| || || || ||| |||||||| | ||| | | ||||| ||| Sbjct 905707 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACACTATCAGATTACAAT 905766 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || ||||||||||| || || ||| | || | ||||| || || |||| Sbjct 905767 ATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGGCA 905815 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 111083 TTTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCG 111142 ||||| || || || ||||| || ||||| ||||| ||||| ||||||||||| || Sbjct 904886 TTTATTTCAGCTTCAAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTC 904945 Query 111143 TGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAG 111202 ||||| ||| || || | ||| | || ||| ||||| |||||||| | Sbjct 904946 TGGAAGTGGAGGCCTCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGG 905005 Query 111203 GCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAA 111262 | |||| ||||| || | ||||| | ||| || |||||||| |||||| | Sbjct 905006 GAATTCCTCCAGATCAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTA 905065 Query 111263 CTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCT 111317 || | | || || ||||| || || || || || || || || || ||||||| Sbjct 905066 CTCTTTCTGACTACAATATTCAGAAGGAGTCAACTCTTCACTTGGTCCTGCGTCT 905120 >seq158 Length=288468 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || ||| | || |||||||| ||||| ||||| ||| | Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || || |||||| ||||||||||| |||| ||||| Sbjct 89709 GATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 89768 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| |||| ||| || || ||| | |||||| || || | || || || Sbjct 89769 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAAC 89828 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| ||||| ||||| || | || | || || |||||||| Sbjct 89829 ATTCAAAAGGAATCCACACTTCACCTTGTACTTCGACTTCGCGGTGG 89875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421779851255248