Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq335 118 1e-21 seq158 111 1e-19 >seq335 Length=1594555 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| || |||||||| |||||| ||| || |||||||| ||||| || Sbjct 906729 CCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906670 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || ||||| || ||||| || || || ||||| ||||| | || Sbjct 906669 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906610 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||| ||| ||| |||| || | ||| | | ||||||| | || || Sbjct 906609 ATGCCTTCCTTATCC-TGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906551 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || |||||||| || | || || ||||||||||||||| Sbjct 906550 TTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCATG 906502 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || ||||||||||||||| ||||| || Sbjct 906273 CCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 906214 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || ||| |||| || | || || || || || || || ||||| ||||| | ||| Sbjct 906213 AGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGA 906154 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || |||||| ||| |||| |||| ||| | | |||||| | ||| || Sbjct 906153 ATTCCTTCTTTGTCC-TGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTAC 906095 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT-ACGAAAATCTGCAT 41862 |||| || || || ||||| ||||| || ||| |||||||| ||||| Sbjct 906094 TTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCAT 906046 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||||| |||||| ||| || |||||||| ||||| || ||||| | Sbjct 906492 AGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAAAGGGTCCTT 906433 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||| || ||||| || || || ||||| ||||| | || | || ||| Sbjct 906432 CCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCC 906373 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 || ||| ||| |||| || | ||| | | ||||||| | || || || | || Sbjct 906372 TTATCC-TGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGACTTCTAAGGT 906314 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| |||||||| || | || || || ||||||||||| Sbjct 906313 TATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCAT 906275 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | |||||| | |||| || || || |||||||||||| || ||||| || Sbjct 905357 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 905298 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||||||||| || || ||||| ||||| ||||| | || Sbjct 905297 AGAGTACGTCCATCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGG 905238 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | | ||| |||||| |||||| Sbjct 905237 ATACCCTCTTTGTCCTGGATTTT 905215 >seq158 Length=288468 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||||| || || || || ||||| ||||||||||| || || || Sbjct 89410 AGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCGGACAGAGTACGT 89351 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || |||||||||||||| ||||| |||| | ||| ||||| | ||||| || || Sbjct 89350 CCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCT 89291 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || || ||| || ||| | | | ||||||| | ||| ||||| | || Sbjct 89290 TTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAACCTCGAGGGTG 89231 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || ||||| || || ||||||||||||||||| Sbjct 89230 ATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTT 89190 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || |||| |||||||| || || ||| ||||| || || |||||||| Sbjct 91699 CCGCCACGAAGTCGTAGTACCAGATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGAC 91640 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| || ||||| |||| ||||| ||||||| |||| Sbjct 91639 AGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGA 91580 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||| ||| || ||| | | | ||||| | || || Sbjct 91579 ATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACT 91520 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || || ||||| ||||| ||||||||||| || |||||| Sbjct 91519 TCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCATG 91472 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || ||||||||||||||| || || |||||||||||||| || Sbjct 90103 CCTCCACGAAGTCGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTATAGTCTGAC 90044 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || | || || || ||||| |||| | ||| ||||| | || Sbjct 90043 AATGTGCGACCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGG 89984 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | | ||| |||||| ||| |||| | ||||| | |||||| | ||| || Sbjct 89983 ATTCCCTCTTTGTCC-TGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCGAC 89925 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||||||||| || ||||| ||||| |||||||| Sbjct 89924 TTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89877 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||| ||||||||||| || ||||| || || || | || Sbjct 90544 AAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCT 90485 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||| ||||| || ||||| |||| | ||| ||||| | || | | ||||| ||| Sbjct 90484 TCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATCC 90425 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || |||| ||| | | || ||| | ||| || || | || || || Sbjct 90424 -TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 90366 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || |||| ||||| ||||| |||||||| Sbjct 90365 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90333 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||| ||||||||||| || ||||| || || || | || Sbjct 91000 AAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCT 90941 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||| ||||| || ||||| |||| | ||| ||||| | || | | ||||| ||| Sbjct 90940 TCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATCC 90881 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || |||| ||| | | || ||| | ||| || || | || || || Sbjct 90880 -TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 90822 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || |||| ||||| ||||| |||||||| Sbjct 90821 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90789 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||| ||||||||||| || ||||| || || || | || Sbjct 91456 AAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCT 91397 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||| ||||| || ||||| |||| | ||| ||||| | || | | ||||| ||| Sbjct 91396 TCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATCC 91337 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || |||| ||| | | || ||| | ||| || || | || || || Sbjct 91336 -TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 91278 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || |||| ||||| ||||| |||||||| Sbjct 91277 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 91245 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || || ||||| || |||||||| || || || | || ||||||||||| || ||||| Sbjct 89611 TCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCCTCGAGCTGCTTACCAGCGAAG 89552 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGA 41790 |||| | ||| ||||| | ||||| || ||| |||| | ||| | || | ||| | Sbjct 89551 ATCAACCTCTGCTGGTCTGGGGGAATGCCCTCTTTGT-CTTGAATCTTGGCCTTGACATT 89493 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | |||||| | ||| ||||| | || || || || || |||| ||||| || Sbjct 89492 CTCAATAGTGTCAGAAGCCTCAACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTAAC 89433 Query 41851 GAAAATCTGCATG 41863 || ||||||||| Sbjct 89432 AAAGATCTGCATG 89420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462268760877600