Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq74093 203 3e-47 >seq74093 Length=5834 Score = 203 bits (224), Expect = 3e-47 Identities = 434/640 (68%), Gaps = 14/640 (2%) Strand=Plus/Minus Query 16779 CCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGT 16838 ||| ||| | | ||| | ||| || |||||||| ||||||| | |||||||| | || | Sbjct 1843 CCAATTCCACTAATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAAT 1784 Query 16839 TCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCG 16898 |||| || || | | || || || || || || || || ||| || || ||| | Sbjct 1783 TCATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACAG 1724 Query 16899 CTTCCTTAATAATACTAGCAA----CTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTA 16954 | || |||||| | || ||| || || ||||| || | | |||||| Sbjct 1723 CCTCTGAAATAATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACC----AAATGTTTG 1668 Query 16955 AACATCAGACA-TGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGA 17013 ||||| | ||| ||| ||||| || ||||| ||||| || | ||| | ||| ||||| Sbjct 1667 AACATTA-ACACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGA 1609 Query 17014 AAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCC 17073 ||||| | |||||||| || |||||||| ||||||||||| | ||||| || Sbjct 1608 GAATGTAAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCC 1549 Query 17074 AGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTC 17133 | ||||||||||| || || | ||||| || || | |||||| | | | || | Sbjct 1548 ACTGAAGAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGC-TG 1490 Query 17134 TTTGTTACG-AATCCATTTCTGCA-CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTT 17191 || | | | |||||| || | |||| || ||||| | || | | ||| ||| Sbjct 1489 ATTTTGAGGAAATCCA-GGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTT 1431 Query 17192 TCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGT 17251 || | ||| ||||||| | |||| || | || | || || ||||| || | Sbjct 1430 TCAACGGCATTAAATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAA 1371 Query 17252 AGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGG 17311 | |||||||||||| ||||| | ||| ||||||||||| ||||| || || || || || Sbjct 1370 ATGCTGTACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGA 1311 Query 17312 GCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCG 17371 || || | | |||||||||| | |||| ||||| | |||||||| || || || ||| Sbjct 1310 GCCTCAGTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCG 1251 Query 17372 TCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAAT 17411 ||| || || ||||| ||||| | ||| ||| |||| Sbjct 1250 TCGGAAGCAGCAAAAAAGGCCAAAACATGTGAAATAAAAT 1211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516353000265960