Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq181649 185 1e-41 seq7894 163 4e-35 seq47065 149 9e-31 seq175855 109 8e-19 seq55885 107 3e-18 >seq181649 Length=1561 Score = 185 bits (204), Expect = 1e-41 Identities = 440/655 (67%), Gaps = 19/655 (3%) Strand=Plus/Minus Query 205317 TCtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCC 205376 |||||||||| |||||||||||||| | |||||| || | ||||||| ||| || Sbjct 986 TCTTTTTATTATTAATTTTGGAAATTGACGTGGTGTTCGCTTCAATTGTTCTTTCAAAGG 927 Query 205377 ATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTT 205436 | ||| || | ||| | ||| | || ||| || |||| | |||||| |||||| Sbjct 926 TTCAATGTGCGTTTTATAGACATGAGTATCGCCAGTAGTATGCACAAATTCTCCTGGTTT 867 Query 205437 TAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496 ||| || | ||| || ||||| || || | | | ||| ||| | |||||| || Sbjct 866 CAAACCGGTAATATGGGCTATCATGTAGGTTAGCAGAGCATACGAAGCGATATTAAACGG 807 Query 205497 TACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATT 205556 || || | ||||||||| || | |||||| | ||||| | || || | ||| Sbjct 806 CACTCCAAGACCCATATCCGCACTACGTTGATATAACTGACAGGATAG---TTCACCATT 750 Query 205557 AATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTAT 205616 | ||| |||||| | ||||| ||||| || || | | |||| | | ||| | Sbjct 749 AGCCACAAAAAATTGCGCCAAACAGTGACAGGGAGGCAAAGCCATTTGGGGTATATCAAC 690 Query 205617 AGGATTCCAGGCTGTTAATATTATATTTC-TAGAT--TCAGGtttattttttattttatt 205673 ||||||||||| | | |||||| | | | | | | ||| || | ||| |||| Sbjct 689 GGGATTCCAGGCAG---ACATTATAATGCGTCGGTCATTAGGGTTGGTGCGTATGGTATT 633 Query 205674 tatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAAT--TTGTATCCATATCAATA 205731 || | | | | | |||||||| ||| | ||| || || | | || | | | | Sbjct 632 GATTACCTCTTTCAGTTGATCAACTCCCTCATTGGTGTAGTCATCGTGACAAGTGC--GA 575 Query 205732 TATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTT 205791 || || || ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 574 TACTTGGCGCCAAAATGACGCCATTGAAAACCATAAACTGGACCCAAATCGCCTTCTTCA 515 Query 205792 CTATCATTAAAACCACGtttttttatatatt-ttaatgatccattttcatcccaaatatg 205850 | ||| | ||||| ||| | | | ||| || | | ||| ||||||||||||| Sbjct 514 CGATCGGTGAAACCTAATTTATCCAGAAATTGCCGATCA-CTATTACCATCCCAAATATG 456 Query 205851 gattcctttattttttaGAATA--TTTGTATTAGTTGATCCAGATATAAACCATAATAAT 205908 || ||| | | || |||| |||| || || | ||| |||||||||| || | Sbjct 455 AAT--GTTTTTCTCTTGCAATACTTTTGCATCGGTGCAGCCATGGATAAACCATAGTAGT 398 Query 205909 TCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAATGAAT 205963 ||||| | | |||||||||| | | || || || | |||||||||||||| Sbjct 397 TCTTCCGCCACGGCTCTCCAAAATACTCGCTTGGTAGTCAGTAATGGAAATGAAT 343 >seq7894 Length=2644 Score = 163 bits (180), Expect = 4e-35 Identities = 204/276 (74%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | |||||||| || |||||||| || ||| ||||| |||| | Sbjct 2311 ATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCC 2370 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||||||||| || ||||| || || || |||||| Sbjct 2371 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 2430 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || || |||||||| || || | || ||||| ||||| ||| Sbjct 2431 CAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 2490 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 |||||||||||||| || ||||||||||| || ||||| || ||||| || ||| ||| Sbjct 2491 ATTCAAAAAGAATCTACATTGCATTTGGTATTGCGTTTGCGTGGTGGCATGCAAATATTT 2550 Query 124778 AT--AAAAATTGATTGTAAATA-AATATCACTACAA 124810 | ||| ||| | | ||| | |||| ||||| || Sbjct 2551 GTTAAAACATTAACGGGAAAAACAATAACACTAGAA 2586 Score = 141 bits (156), Expect = 1e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | ||||| |||| ||||| || || || ||||| | ||| | Sbjct 2082 AATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCTTC 2141 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| || | || |||||||||||||| || ||||| || || ||||| Sbjct 2142 TGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATCCCCCCAGATCA 2201 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| || |||||||| || || | || || || |||||||| Sbjct 2202 ACAACGTTTAATTTTTGCCGGCAAACAATTGGAAGACGGACGCACTTTGTCCGATTATAA 2261 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| |||||||| | ||||||||| ||||| | || ||||| || Sbjct 2262 TATTCAAAAGGAATCAACACTTCATTTGGTTCTACGTCTTCGTGGTGGCAT 2312 >seq47065 Length=7920 Score = 149 bits (164), Expect = 9e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124537 CAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAA 124596 ||||||| || ||| ||||||| ||||| ||||| || || || | ||| | ||| | Sbjct 2653 CAATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACCTT 2712 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 |||||| || ||| | ||| || ||||| || ||||| || || ||||| |||| Sbjct 2713 CTGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCAGATC 2772 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | ||| | || |||||||| ||||||||||| || ||| | || || || ||||| | Sbjct 2773 AGCAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTATCCGATTACA 2832 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 | || ||||| ||||||||||||||||| || ||||| | || |||||| Sbjct 2833 ACATCCAAAAGGAATCAACTTTGCATTTAGTGTTACGCCTCCGTGGTGGT 2882 >seq175855 Length=19510 Score = 109 bits (120), Expect = 8e-19 Identities = 166/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 124535 TACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAG 124593 |||| ||||| || || | || || ||||| || ||||| || || | || |||| Sbjct 16422 TACAGATGCAGATCTTCGTCAAAACTCTAACTGGTAAAACCATCACCTTGGAAGTTGAGC 16481 Query 124594 CAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTG 124653 | || || ||| ||| | || ||||| ||||| ||||||||||| || || | Sbjct 16482 CTTCCGACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAG 16541 Query 124654 ATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATT 124713 |||||||| | | || || || || || ||||| || ||| |||| || || || | Sbjct 16542 ATCAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGCACCTTGTCCGACT 16601 Query 124714 ATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || || ||||| ||||| ||||| ||||||||| | ||| | || |||||||| Sbjct 16602 ACAACATCCAAAAGGAATCCACTTTACATTTGGTTCTCCGTCTTCGTGGTGGTAT 16656 >seq55885 Length=1496 Score = 107 bits (118), Expect = 3e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| | || || ||||| || || | || | ||| | | Sbjct 150 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAAACCATCACCTTGGAAGTGGAACCTTCT 209 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| |||| || ||||| ||||| |||||||| || || |||||| Sbjct 210 GATACTATTGAGAATGTAAAGGCCAAGATTCAGGATAAGGAAGGTATTCCCCCAGATCAA 269 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || || |||||||| || ||| | || || || || |||||| Sbjct 270 CAGCGTTTAATTTTCGCCGGTAAACAATTGGAAGATGGCCGCACTTTGTCGGACTATAAT 329 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| || ||||| || | |||||||| |||||| | || || || Sbjct 330 ATTCAGAAGGAATCTACACTCCATTTGGTGTTACGTCTTCGCGGAGG 376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753715174409600