Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq47065 95.1 2e-14 seq7894 89.7 8e-13 >seq47065 Length=7920 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | || | ||| || ||||| ||||| ||||| || || || ||||| || Sbjct 2881 CCACCACGGAGGCGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGAT 2822 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || |||||||||||||||||||| | | ||||||||| || ||| Sbjct 2821 AGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGA 2762 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 2761 ATTCCCTCTTTGTCCTG 2745 >seq7894 Length=2644 Score = 89.7 bits (98), Expect = 8e-13 Identities = 155/231 (67%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | ||| | || |||||||| | || ||||| ||| || ||||||||||| || Sbjct 2309 CCACCACGAAGACGTAGAACCAAATGAAGTGTTGATTCCTTTTGA-ATATTATAATCGGA 2251 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | || || |||||||| || |||||||| || | ||| ||||| || || Sbjct 2250 CAAAGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGG 2191 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 || || || |||||||| |||||| ||| ||| || Sbjct 2190 GATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGAC 2131 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 |||| ||||| || || || ||||| || || | ||| || |||||||| Sbjct 2130 CTCTAAGGTGATGGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTT 2080 Score = 89.7 bits (98), Expect = 8e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 ||||||||||| || ||||||||||| ||||| ||||| || | || | | || Sbjct 2522 AATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCT 2463 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || |||||||| ||||| || || || | ||| ||||| ||||| |||||||| || ||| Sbjct 2462 TCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCT 2403 Query 146186 TG 146187 || Sbjct 2402 TG 2401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741813064234240