Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq74093 250 2e-61 >seq74093 Length=5834 Score = 250 bits (276), Expect = 2e-61 Identities = 495/724 (68%), Gaps = 8/724 (1%) Strand=Plus/Minus Query 16050 CCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGT 16109 ||||||||| ||||| | ||| || |||||||| ||||| | |||||| |||| | Sbjct 1843 CCAATTCCACTAATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAAT 1784 Query 16110 TCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCG 16169 |||| || ||||| | |||||| | || || ||||| || | || ||| || ||||| | Sbjct 1783 TCATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACAG 1724 Query 16170 CTTCAATGATTATATCTCTTACTACACTATTTAAC-GGAGGGTTTAATAAGTGTTTAAAC 16228 | || || || || | | | | || || ||| | | | || ||||| ||| Sbjct 1723 CCTCTGAAATAATTTCAATAA-TCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGAAC 1665 Query 16229 ATTATACAA-GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAA 16287 |||| ||| ||||||||||| || || || || || | | || || || || || || Sbjct 1664 ATTA-ACACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAA 1606 Query 16288 TGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGA 16347 ||||||||| ||||| || || ||||| || | ||||||||||| || || ||| Sbjct 1605 TGTAAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACT 1546 Query 16348 AAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTT-CT-Attt 16405 ||||||||||||||||| || ||||| |||| | || || || | || || |||| Sbjct 1545 GAAGAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGCTGATTT 1486 Query 16406 ttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCT 16465 | | ||||| | |||||||| ||||| ||||||| ||| | || Sbjct 1485 TGAGGAA--ATCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCA 1428 Query 16466 ATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAA 16525 | |||||||||| || | | || | ||||| ||| || ||||| || | | Sbjct 1427 ACGGCATTAAATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATG 1368 Query 16526 CTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCT 16585 || |||||||| || |||| || ||||| ||||| ||||||||||| || || | ||| Sbjct 1367 CTGTACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCC 1308 Query 16586 TCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCG 16645 || | | ||| ||||| | | || | ||| | | ||||| || ||||| || ||| Sbjct 1307 TCAGTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCG 1248 Query 16646 CTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTT 16705 ||| |||||||| || | | ||| |||||||| ||| || || | |||| | Sbjct 1247 GAAGCAGCAAAAAAGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTA 1188 Query 16706 AACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACA 16765 ||| || || | ||| || | ||| || |||||||||||||||||||| || || Sbjct 1187 TTCCAATCGGACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCA 1128 Query 16766 GCCT 16769 |||| Sbjct 1127 GCCT 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461446216254200