Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq7894 111 1e-19 seq175855 100 2e-16 seq55885 86.0 5e-12 >seq7894 Length=2644 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||||||||||| |||||||| || || |||| || || | ||| Sbjct 2294 AGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCT 2235 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||||||||||||| ||| | || | | ||||||||| ||| | || |||||||| Sbjct 2234 TCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCT 2175 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||||| |||||| | ||| ||| ||| || ||| || | ||||||| | Sbjct 2174 TGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTC 2115 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 ||||| || || || || || || || ||||||||| Sbjct 2114 TTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTTT 2079 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 18116 TACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTC 18175 ||||| || | ||| |||||||||||||| ||||| || | || ||| | ||||| Sbjct 2520 TACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTC 2461 Query 18176 CAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGC 18235 |||||||||||| || |||| | | ||||||||| || | |||||||| || Sbjct 2460 CAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTG 2401 Query 18236 AATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294 ||||| | || || || | | ||| ||| || ||||| || | |||||| ||| Sbjct 2400 AATTT-TAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTGATGGTTT 2342 Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| |||| ||| || ||||| |||||||| Sbjct 2341 TGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 >seq175855 Length=19510 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179 |||| ||||| ||||| ||||| ||||||||||||| || || || |||||||||| Sbjct 16630 ATGTAAAGTG--GATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAAT 16573 Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239 || || || || |||| | | ||||||||| ||| | ||||| || || ||| Sbjct 16572 TGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGGATT 16513 Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299 | |||||| | | ||| |||||| ||||| ||| | ||||||| |||| || Sbjct 16512 TTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTTTTACCA 16453 Query 18300 GTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331 || | ||||| || || || ||||| | ||| Sbjct 16452 GTTAGAGTTTTGACGAAGATCTGCATCTGTAA 16421 >seq55885 Length=1496 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || || | | |||| || ||||| ||||| || ||||| || ||||| | | Sbjct 376 CCTCCGCGAAGACGTAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGAC 317 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||||||||||||||| || || | || | | |||||||| ||| Sbjct 316 AAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGA 257 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| ||| | ||| || | ||| ||| ||| || || | Sbjct 256 ATACCTTCCTTATCCTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCACT 197 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| |||| || ||||| || || || ||||| ||||| Sbjct 196 TCCAAGGTGATGGTTTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378491716810515