Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq74093 178 1e-39 seq7894 129 5e-25 >seq74093 Length=5834 Score = 178 bits (196), Expect = 1e-39 Identities = 474/713 (66%), Gaps = 26/713 (4%) Strand=Plus/Plus Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||| ||||| || |||||||| || |||||||| || || ||| ||| || ||||| Sbjct 1124 AGGCTGAAGCCTCTTTTTGGACTGTAGAAGAAGTGGATCTCTCTTCTGATATGTCCGATT 1183 Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708 || || || | || ||| | |||||||| ||| || ||||| ||||| || | Sbjct 1184 GGAATAGACTTACCGACAATGAACGTCATTTTATTTCACATGTTTTGGCCTTTTTTGCTG 1243 Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 | ||||| ||||| || || || ||| |||| ||| | || || || ||||| ||||| | Sbjct 1244 CTTCCGACGGTATAGTCAATGAAAATCTGGTTGAACGCTTCTCCCAGGAAGTTCAAGTTA 1303 Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828 | ||||| | || || || || |||||| | ||||| |||||||| || || ||||||| Sbjct 1304 CTGAGGCTCGTTGTTTCTATGGTTTTCAAATAGCCATGGAAAACGTTCACTCTGAAATGT 1363 Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGA--GAAACGTAGACTGTTCAA 57886 | | | || ||||| ||| | | || || ||| | || | ||| || || || Sbjct 1364 ACAGCATTTTGATTGATACCTACATTACAGATAATGACCAACGAGA-GTAC-CTATTTAA 1421 Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGGAT 57943 || | ||||||||||| || || || || || || ||| | | ||||| Sbjct 1422 TGCCGTTGAAACAATGCCGGC---CGTTAAACGTAAAGCTGATTGGGCTTTAGCCTGGAT 1478 Query 57944 A-----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAA 57998 |||| | || || || || || | | || || || || || || ||| Sbjct 1479 TTCCTCAAAATCAGCAA----ACTTTGGC-GAACGCATCATTGCTTTTGCTGCTGTTGAA 1533 Query 57999 GGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATG 58058 ||||||||||| || || || || | ||||||||| |||||||||| || || ||| Sbjct 1534 GGTATATTCTTCAGTGGAAGTTTCGCTTCTATATTTTGGTTGAAGAAACGTGGTCTTATG 1593 Query 58059 CCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTT 58118 ||||| || || || || || ||||| || || || ||||| | || ||||||| Sbjct 1594 CCCGGTCTTACATTCTCTAATGAATTGATCTCTCGTGATGAGGGCTTACACTGTGATTTT 1653 Query 58119 GC-GTGCCTAATGTACTCTCACATT--GTCAATAAACCGACGCGGGATCGCATCTTGGAC 58175 || ||| |||||| || ||||| || | || | ||| | || | || Sbjct 1654 GCAGTG-TTAATGT--TCAAACATTTGGTGCAACGTCCAAGCAAGGAGAGGATTATTGAA 1710 Query 58176 ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCC 58235 ||||| | ||||| || || ||| | ||||| | || || ||||| || || | Sbjct 1711 ATTATTTCAGAGGCTGTTAAAATTGAACAAGAGTTCTTAACTGATGCCCTGCCTGTTGAT 1770 Query 58236 ATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGA 58288 | | || ||||| || || ||||| | || ||||| |||||||| || Sbjct 1771 TTAATTGGCATGAATTGTGGATTAATGTCCGAATATATTGAATTTGTTGCTGA 1823 >seq7894 Length=2644 Score = 129 bits (142), Expect = 5e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| ||||| |||||||| ||||| | || ||||| || || Sbjct 2310 CATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTC 2369 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | | |||| || ||| | ||| ||||||||||| | || || || || Sbjct 2370 CGATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCA 2429 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||| |||| |||||||||||||| ||||||||| || || ||||| || Sbjct 2430 ACAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAA 2489 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 |||||||||||||| || | ||| ||||| Sbjct 2490 TATTCAAAAAGAATCTACATTGCATTTGGTA 2520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444739203768240